Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | V1235_RS12770 | Genome accession | NZ_CP143348 |
| Coordinates | 2649649..2652228 (-) | Length | 859 a.a. |
| NCBI ID | WP_001210050.1 | Uniprot ID | V5VGK1 |
| Organism | Acinetobacter baumannii strain 2023CK-01512 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2644649..2657228
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V1235_RS12750 (V1235_12730) | - | 2645606..2645950 (-) | 345 | WP_000654268.1 | hypothetical protein | - |
| V1235_RS12755 (V1235_12735) | rlmKL | 2646189..2648393 (+) | 2205 | WP_001098013.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| V1235_RS12760 (V1235_12740) | - | 2648419..2648835 (-) | 417 | WP_001060738.1 | hypothetical protein | - |
| V1235_RS12765 (V1235_12745) | - | 2649104..2649592 (+) | 489 | WP_000941316.1 | CinA family protein | - |
| V1235_RS12770 (V1235_12750) | clpC | 2649649..2652228 (-) | 2580 | WP_001210050.1 | ATP-dependent chaperone ClpB | Regulator |
| V1235_RS12775 (V1235_12755) | - | 2652530..2653336 (+) | 807 | WP_001237344.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| V1235_RS12780 (V1235_12760) | - | 2653333..2653758 (-) | 426 | WP_001026230.1 | GNAT family N-acetyltransferase | - |
| V1235_RS12785 (V1235_12765) | - | 2653850..2654272 (-) | 423 | WP_001195082.1 | OsmC family protein | - |
| V1235_RS12790 (V1235_12770) | - | 2654351..2654470 (-) | 120 | Protein_2505 | hypothetical protein | - |
| V1235_RS12795 (V1235_12775) | crp | 2654711..2655418 (+) | 708 | WP_000203217.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
| V1235_RS12800 (V1235_12780) | - | 2655579..2656628 (+) | 1050 | WP_001159802.1 | NADP(H)-dependent aldo-keto reductase | - |
Sequence
Protein
Download Length: 859 a.a. Molecular weight: 95142.36 Da Isoelectric Point: 4.9733
>NTDB_id=843528 V1235_RS12770 WP_001210050.1 2649649..2652228(-) (clpC) [Acinetobacter baumannii strain 2023CK-01512]
MRFEKFTNRLQQALSDAQSLAMGKDHTAIAGIHILSTLLEEPSNISLLQQAGARLPELKQKLEQALKDAPTIANPTGDVN
LNPEAVKALNLADRYAQKAGDEFLSTDWVLLGLAETGETKNILSAVGVTPDSLRKVIENIRGSDKVMSNNHEDQRDSLNK
YTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLG
SLLAGAKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYI
EKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKM
EIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKAR
IAFEKAQREGDLAEAARLQYGVIPELQKQLEQDEVAEENEEPKLIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLHM
EEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHS
VSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS
QDVRELGEGATDDEVRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDSAFDL
LIDAGFDPVYGARPLKRAIQQQVENTLAQKILSGDFVAGDTILVKGENGHLVFDKLKLS
MRFEKFTNRLQQALSDAQSLAMGKDHTAIAGIHILSTLLEEPSNISLLQQAGARLPELKQKLEQALKDAPTIANPTGDVN
LNPEAVKALNLADRYAQKAGDEFLSTDWVLLGLAETGETKNILSAVGVTPDSLRKVIENIRGSDKVMSNNHEDQRDSLNK
YTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLG
SLLAGAKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYI
EKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKM
EIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKAR
IAFEKAQREGDLAEAARLQYGVIPELQKQLEQDEVAEENEEPKLIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLHM
EEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHS
VSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS
QDVRELGEGATDDEVRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMSLTVDDSAFDL
LIDAGFDPVYGARPLKRAIQQQVENTLAQKILSGDFVAGDTILVKGENGHLVFDKLKLS
Nucleotide
Download Length: 2580 bp
>NTDB_id=843528 V1235_RS12770 WP_001210050.1 2649649..2652228(-) (clpC) [Acinetobacter baumannii strain 2023CK-01512]
ATGCGATTTGAAAAATTTACGAACCGCTTGCAGCAAGCCCTCTCAGATGCTCAATCCTTAGCGATGGGTAAAGACCATAC
AGCTATAGCAGGTATTCATATTTTGAGTACTTTATTGGAAGAGCCGTCCAATATTAGTTTGTTGCAACAAGCAGGTGCAC
GGTTACCTGAACTTAAACAAAAGCTAGAGCAGGCTTTAAAAGATGCTCCGACTATTGCTAACCCGACGGGCGATGTCAAT
TTAAACCCAGAAGCAGTTAAAGCACTCAACTTGGCAGATCGATACGCGCAAAAAGCTGGCGATGAATTTTTGTCAACTGA
CTGGGTTTTATTGGGCTTGGCAGAAACTGGTGAAACAAAAAATATTTTAAGTGCCGTAGGTGTAACTCCCGACAGCTTAC
GCAAAGTAATTGAAAATATTCGAGGTAGTGACAAAGTCATGAGTAATAATCACGAAGACCAACGTGACTCACTTAATAAA
TATACGATTGATTTAACCGAGCGGGCTTTATCGGGGAAACTTGATCCGGTGATTGGACGTGATGATGAGATCCGCCGTAC
CATTCAGGTCTTGTCACGCCGTACTAAAAATAACCCAGTACTCATCGGTGAACCTGGGGTAGGTAAAACCGCTATTGTTG
AAGGTTTGGCACAACGTATTGTTAATGGTGAAGTACCAGAAGGCTTAAAGAATAAACGTGTTTTATCGTTAGATTTAGGT
TCATTGCTTGCAGGTGCTAAGTATCGTGGTGAGTTTGAAGAACGTTTAAAAGCTGTTTTAAAAGATTTGGCGAAACACGA
AGGCGAAATCATCTTATTCATTGACGAGCTACATACGCTCGTTGGTGCTGGTAAAGGTGACGGCGCGATGGATGCAGGTA
ATATGTTAAAACCTGCGTTGGCTCGTGGTGAGTTGCGCTGTGTGGGTGCAACTACCTTAGATGAATATCGCCAATACATT
GAAAAAGACGCAGCCTTGGAGCGTCGTTTCCAAAAAGTGCTGGTCGATGAACCAAGTGTAGAAGATACCATTGCGATTTT
ACGTGGTCTGAAAGAAAAGTATGCGACTCACCATGGCGTACAGATTTTAGATTCAGCGATTATTGCTGCGGCGAAAATGT
CTCATCGTTATATTACAGATCGTCAATTACCGGACAAGGCGATTGACTTGATTGATGAGGCAGCTTCTCGTATTAAGATG
GAAATCGATTCTAAGCCAGAAGCACTTGATAAACTTGACCGCCGTTTAATCCAGTTGAAAATGCAATTGGAAGCGGTGAA
AAAAGATGAAGACGCAGGCAGTAAGGCCGAAGTTACTCATCTTGAAAAACAGATTGCTGAAGTCGAGAAAGAATACAACG
ATCTGGAAGAAGTGTGGAAAGCTGAGAAAACATTGGTAGAAGGCACTAAACAAGCTCAGGTTGAACTTGATAAAGCACGT
ATTGCTTTTGAAAAAGCTCAGCGCGAAGGCGATTTGGCAGAAGCAGCACGTTTGCAATATGGTGTAATTCCAGAGTTGCA
AAAACAACTTGAACAAGATGAAGTTGCTGAAGAAAACGAAGAGCCAAAACTCATTCGTACAAAAGTAACTGAAAATGAAA
TTGCCGAAGTCGTTAGTGCTGCAACAGGTATTCCGGTTGCTAAAATGATGCAAGGCGAGCGTGAAAAACTTCTTCATATG
GAAGAGTTTTTACATGACCGTGTTGTTGGGCAAGATGAAGCAGTTGTTGCGGTATCGAATGCAGTTCGTCGTTCACGTGC
CGGTTTGTCTGACCCGAATCGTCCTAGCGGATCATTCTTGTTCTTAGGACCAACAGGTGTAGGTAAAACTGAGTTAACTA
AAGCTTTAGCTAACTTCTTGTTTGACAGTGATGATGCCATGATTCGTATCGATATGAGTGAATTCATGGAGAAACATTCT
GTCAGCCGTTTAGTTGGTGCGCCTCCGGGTTACGTAGGTTACGAAGAGGGCGGTGTTTTAACCGAAGCTGTTCGCCGTAA
ACCATATAGCGTAGTGTTGTTTGATGAGGTTGAAAAAGCGCATCCAGATGTCTTCAATATCTTGCTACAAGTGTTAGACG
ATGGACGCTTAACCGACTCACAAGGTCGTGTAGTGGACTTTAAAAACACGGTTATTGTGATGACATCGAACTTGGGTTCA
CAAGATGTACGTGAACTTGGTGAAGGTGCAACTGATGATGAAGTGCGTACTATTGTAATGAATGCGGTAAGTCAGCATTT
CCGTCCGGAGTTTATTAACCGGATTGATGAGTTGGTGATTTTCCATTCACTCAAAAAAGCACAGATTCGTGGCATTGCCG
ATATTCAGTTGGACCGCTTACGCTCACGACTTGTTGATCGTGATATGAGTTTAACTGTAGATGACAGTGCATTTGACTTA
TTGATTGACGCTGGTTTTGATCCTGTATACGGAGCGCGTCCATTGAAACGTGCAATTCAACAACAGGTTGAAAATACACT
AGCTCAAAAAATCTTGTCAGGTGACTTTGTTGCGGGTGATACCATTTTAGTTAAAGGCGAAAATGGTCACTTAGTGTTTG
ATAAGCTGAAACTCAGCTAA
ATGCGATTTGAAAAATTTACGAACCGCTTGCAGCAAGCCCTCTCAGATGCTCAATCCTTAGCGATGGGTAAAGACCATAC
AGCTATAGCAGGTATTCATATTTTGAGTACTTTATTGGAAGAGCCGTCCAATATTAGTTTGTTGCAACAAGCAGGTGCAC
GGTTACCTGAACTTAAACAAAAGCTAGAGCAGGCTTTAAAAGATGCTCCGACTATTGCTAACCCGACGGGCGATGTCAAT
TTAAACCCAGAAGCAGTTAAAGCACTCAACTTGGCAGATCGATACGCGCAAAAAGCTGGCGATGAATTTTTGTCAACTGA
CTGGGTTTTATTGGGCTTGGCAGAAACTGGTGAAACAAAAAATATTTTAAGTGCCGTAGGTGTAACTCCCGACAGCTTAC
GCAAAGTAATTGAAAATATTCGAGGTAGTGACAAAGTCATGAGTAATAATCACGAAGACCAACGTGACTCACTTAATAAA
TATACGATTGATTTAACCGAGCGGGCTTTATCGGGGAAACTTGATCCGGTGATTGGACGTGATGATGAGATCCGCCGTAC
CATTCAGGTCTTGTCACGCCGTACTAAAAATAACCCAGTACTCATCGGTGAACCTGGGGTAGGTAAAACCGCTATTGTTG
AAGGTTTGGCACAACGTATTGTTAATGGTGAAGTACCAGAAGGCTTAAAGAATAAACGTGTTTTATCGTTAGATTTAGGT
TCATTGCTTGCAGGTGCTAAGTATCGTGGTGAGTTTGAAGAACGTTTAAAAGCTGTTTTAAAAGATTTGGCGAAACACGA
AGGCGAAATCATCTTATTCATTGACGAGCTACATACGCTCGTTGGTGCTGGTAAAGGTGACGGCGCGATGGATGCAGGTA
ATATGTTAAAACCTGCGTTGGCTCGTGGTGAGTTGCGCTGTGTGGGTGCAACTACCTTAGATGAATATCGCCAATACATT
GAAAAAGACGCAGCCTTGGAGCGTCGTTTCCAAAAAGTGCTGGTCGATGAACCAAGTGTAGAAGATACCATTGCGATTTT
ACGTGGTCTGAAAGAAAAGTATGCGACTCACCATGGCGTACAGATTTTAGATTCAGCGATTATTGCTGCGGCGAAAATGT
CTCATCGTTATATTACAGATCGTCAATTACCGGACAAGGCGATTGACTTGATTGATGAGGCAGCTTCTCGTATTAAGATG
GAAATCGATTCTAAGCCAGAAGCACTTGATAAACTTGACCGCCGTTTAATCCAGTTGAAAATGCAATTGGAAGCGGTGAA
AAAAGATGAAGACGCAGGCAGTAAGGCCGAAGTTACTCATCTTGAAAAACAGATTGCTGAAGTCGAGAAAGAATACAACG
ATCTGGAAGAAGTGTGGAAAGCTGAGAAAACATTGGTAGAAGGCACTAAACAAGCTCAGGTTGAACTTGATAAAGCACGT
ATTGCTTTTGAAAAAGCTCAGCGCGAAGGCGATTTGGCAGAAGCAGCACGTTTGCAATATGGTGTAATTCCAGAGTTGCA
AAAACAACTTGAACAAGATGAAGTTGCTGAAGAAAACGAAGAGCCAAAACTCATTCGTACAAAAGTAACTGAAAATGAAA
TTGCCGAAGTCGTTAGTGCTGCAACAGGTATTCCGGTTGCTAAAATGATGCAAGGCGAGCGTGAAAAACTTCTTCATATG
GAAGAGTTTTTACATGACCGTGTTGTTGGGCAAGATGAAGCAGTTGTTGCGGTATCGAATGCAGTTCGTCGTTCACGTGC
CGGTTTGTCTGACCCGAATCGTCCTAGCGGATCATTCTTGTTCTTAGGACCAACAGGTGTAGGTAAAACTGAGTTAACTA
AAGCTTTAGCTAACTTCTTGTTTGACAGTGATGATGCCATGATTCGTATCGATATGAGTGAATTCATGGAGAAACATTCT
GTCAGCCGTTTAGTTGGTGCGCCTCCGGGTTACGTAGGTTACGAAGAGGGCGGTGTTTTAACCGAAGCTGTTCGCCGTAA
ACCATATAGCGTAGTGTTGTTTGATGAGGTTGAAAAAGCGCATCCAGATGTCTTCAATATCTTGCTACAAGTGTTAGACG
ATGGACGCTTAACCGACTCACAAGGTCGTGTAGTGGACTTTAAAAACACGGTTATTGTGATGACATCGAACTTGGGTTCA
CAAGATGTACGTGAACTTGGTGAAGGTGCAACTGATGATGAAGTGCGTACTATTGTAATGAATGCGGTAAGTCAGCATTT
CCGTCCGGAGTTTATTAACCGGATTGATGAGTTGGTGATTTTCCATTCACTCAAAAAAGCACAGATTCGTGGCATTGCCG
ATATTCAGTTGGACCGCTTACGCTCACGACTTGTTGATCGTGATATGAGTTTAACTGTAGATGACAGTGCATTTGACTTA
TTGATTGACGCTGGTTTTGATCCTGTATACGGAGCGCGTCCATTGAAACGTGCAATTCAACAACAGGTTGAAAATACACT
AGCTCAAAAAATCTTGTCAGGTGACTTTGTTGCGGGTGATACCATTTTAGTTAAAGGCGAAAATGGTCACTTAGTGTTTG
ATAAGCTGAAACTCAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
46.774 |
100 |
0.473 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.052 |
100 |
0.44 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.601 |
82.189 |
0.383 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.886 |
78.347 |
0.383 |
| clpE | Streptococcus mutans UA159 |
46.866 |
81.723 |
0.383 |
| clpC | Streptococcus pneumoniae D39 |
46.459 |
82.189 |
0.382 |
| clpC | Streptococcus pneumoniae Rx1 |
46.459 |
82.189 |
0.382 |
| clpE | Streptococcus pneumoniae TIGR4 |
48.012 |
79.045 |
0.38 |
| clpE | Streptococcus pneumoniae Rx1 |
48.012 |
79.045 |
0.38 |
| clpE | Streptococcus pneumoniae D39 |
48.012 |
79.045 |
0.38 |
| clpE | Streptococcus pneumoniae R6 |
48.012 |
79.045 |
0.38 |