Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QRA08_RS01755 Genome accession   NZ_CP127331
Coordinates   327353..328147 (-) Length   264 a.a.
NCBI ID   WP_011110369.1    Uniprot ID   A0A9Q5QPF5
Organism   Bacillus cereus strain BC116     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 322353..333147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA08_RS01730 (QRA08_01730) - 323782..324015 (+) 234 WP_001190211.1 DUF2627 domain-containing protein -
  QRA08_RS01735 (QRA08_01735) - 324065..324793 (-) 729 WP_075716800.1 glycerophosphodiester phosphodiesterase -
  QRA08_RS01740 (QRA08_01740) - 324844..324990 (+) 147 WP_001247671.1 YycC family protein -
  QRA08_RS01745 (QRA08_01745) - 325168..326694 (-) 1527 WP_406653412.1 hypothetical protein -
  QRA08_RS01750 - 326901..327013 (-) 113 Protein_349 hypothetical protein -
  QRA08_RS01755 (QRA08_01750) spo0A 327353..328147 (-) 795 WP_011110369.1 sporulation transcription factor Spo0A Regulator
  QRA08_RS01760 (QRA08_01755) spoIVB 328435..329733 (-) 1299 WP_002000940.1 SpoIVB peptidase -
  QRA08_RS01765 (QRA08_01760) recN 329852..331591 (-) 1740 WP_000947734.1 DNA repair protein RecN Machinery gene
  QRA08_RS01770 (QRA08_01765) argR 331856..332305 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29415.18 Da        Isoelectric Point: 7.1175

>NTDB_id=843457 QRA08_RS01755 WP_011110369.1 327353..328147(-) (spo0A) [Bacillus cereus strain BC116]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=843457 QRA08_RS01755 WP_011110369.1 327353..328147(-) (spo0A) [Bacillus cereus strain BC116]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAAAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTCGGGCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAATGCTATGATTAAACGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAATTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAACGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACCACAGCAAGCCGTGTGGAGCGAGCAATTC
GTCACGCGATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818