Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QRA08_RS00850 Genome accession   NZ_CP127331
Coordinates   163498..163956 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus cereus strain BC116     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 158498..168956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA08_RS00835 (QRA08_00835) - 159169..159405 (+) 237 WP_000283738.1 hypothetical protein -
  QRA08_RS00840 (QRA08_00840) - 159566..161674 (-) 2109 WP_168410522.1 polyphosphate kinase -
  QRA08_RS00845 (QRA08_00845) ppx 161783..163357 (-) 1575 WP_140155653.1 exopolyphosphatase -
  QRA08_RS00850 (QRA08_00850) kre 163498..163956 (+) 459 WP_000804864.1 YkyB family protein Regulator
  QRA08_RS00855 (QRA08_00855) - 163988..164650 (-) 663 WP_000922469.1 YkyA family protein -
  QRA08_RS00860 (QRA08_00860) - 165264..165917 (-) 654 WP_053563727.1 diguanylate cyclase domain-containing protein -
  QRA08_RS00865 (QRA08_00865) - 166081..166314 (+) 234 WP_000939446.1 SPP1 phage holin family protein -
  QRA08_RS00870 (QRA08_00870) - 166346..166846 (-) 501 WP_000708119.1 hypothetical protein -
  QRA08_RS00875 (QRA08_00875) - 167258..168799 (+) 1542 WP_053563725.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=843455 QRA08_RS00850 WP_000804864.1 163498..163956(+) (kre) [Bacillus cereus strain BC116]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=843455 QRA08_RS00850 WP_000804864.1 163498..163956(+) (kre) [Bacillus cereus strain BC116]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTACATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493