Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   QRA07_RS17635 Genome accession   NZ_CP127321
Coordinates   3702640..3704868 (+) Length   742 a.a.
NCBI ID   WP_233734185.1    Uniprot ID   -
Organism   Acinetobacter pittii strain PC870     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3697640..3709868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA07_RS17610 (QRA07_17655) lnt 3698090..3699649 (+) 1560 WP_233734189.1 apolipoprotein N-acyltransferase -
  QRA07_RS17615 (QRA07_17660) csaA 3699651..3699989 (-) 339 WP_005804172.1 tRNA-binding protein -
  QRA07_RS17620 (QRA07_17665) - 3700136..3700480 (-) 345 WP_233734187.1 hypothetical protein -
  QRA07_RS17625 (QRA07_17670) gspG 3700747..3701262 (-) 516 WP_017385392.1 type II secretion system major pseudopilin GspG -
  QRA07_RS17630 (QRA07_17675) gspF 3701286..3702491 (-) 1206 WP_005065941.1 type II secretion system inner membrane protein GspF -
  QRA07_RS17635 (QRA07_17680) priA 3702640..3704868 (+) 2229 WP_233734185.1 primosomal protein N' Machinery gene
  QRA07_RS17640 (QRA07_17685) kefB 3704945..3706789 (+) 1845 WP_233734183.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  QRA07_RS17645 (QRA07_17690) hslO 3706953..3707828 (+) 876 WP_233734181.1 Hsp33 family molecular chaperone HslO -
  QRA07_RS17650 (QRA07_17695) - 3707966..3708577 (+) 612 WP_002115157.1 LysE family translocator -
  QRA07_RS17655 (QRA07_17700) cbpA 3708724..3709680 (+) 957 WP_069141704.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84032.75 Da        Isoelectric Point: 8.3576

>NTDB_id=843423 QRA07_RS17635 WP_233734185.1 3702640..3704868(+) (priA) [Acinetobacter pittii strain PC870]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVDPSESFTGTFQLKAISDLL
DEEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVQLAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQNCPVILGSATPSIDSYYLVETGKLTSLQLNQRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIENDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEHLRQIAGDIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWLQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=843423 QRA07_RS17635 WP_233734185.1 3702640..3704868(+) (priA) [Acinetobacter pittii strain PC870]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTACATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCATGTAGGCTCACGCGTCGCTATTTCATTTGGGCGCCAAAACCTGA
TTGGCATCATTACTGAAAAAGTTGATCCAAGTGAATCATTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGACCTTTTA
GATGAAGAACCAATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCAGCTCAGTATTACCAATTTCCAATTGGCGA
GGTCATGCAAACCGCCCTACCTGCGTTATTGCGTCAGGGCAAACCGATGGATGTTTTGTTCCATCTTTGGAAAATCACAC
CATGTGATAATGTTGAAGCACTTCTTAAACGCTCTGTTAAGCAACAAGACGCATATCAAATTTTAAAGTTACACCCTGCC
GGAACTACAGAGAATATTCTTAATTTAAGTGGTGTAGAAACGGCTACGCTTAAAGCACTTCAAAAGAAAGGACTGGTTGA
CTGTACGCTTGAACCACACGATTTTAGCCCATCGCCTGTTCAATTGGCACAAATGCCGCTTACACTCAATGAAGACCAAA
AGAAAGCAACCCAGCACGTCGTAAACGCACAGCATCAATACCAAGCCTTTTTATTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTACTAAAGCAAGGTAAGCAAGTACTGGTGTTAGTCCCAGAAATTGGTCT
AACCCCTCAAACGATTTCTCGTTTTAAGTCTCGTTTTAACTGTGATATTGCTCTATTACACTCGGGCCTAAATGACTCCA
AACGCTTGCAGGCATGGCAACAGGCCCAGACTGGCAAAGCATCTATTATTTTAGGAACACGCTCTGCTATCTATACGCCA
CTGCCACGTTTGGGCCTCATCATTTTAGATGAAGAACATGACCTGTCTTATAAACAGCAAGAAGGCTTCCGCTACCATGC
ACGTGATGTCGCACTTTATCGAGGTCACTTGCAAAACTGCCCTGTTATTTTAGGTTCAGCAACACCGAGCATCGATAGTT
ATTATTTGGTCGAAACTGGCAAATTAACTTCACTGCAACTTAATCAACGTGCAGGCCATGCGCTTTTACCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAACAGCATGGAATTAGCCAGCCTTTAATCGAACAGATTAAAAATACCCTAGCTAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTCTGTGAAAGTTGTGGATGGCAAGCAA
ATTGTCCGCATTGTGATGCGCATTTTACGTTGCACACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGTACTGTT
CATCGCTTGCCCGATCACTGCCCTGAATGCCAGCAAAAAAGCCTAAAAACCTTAGGTGCTGGAACGGCTAAGGTTGAAGA
GCACTTACAAGAGCTATTTCCAGACTATGATGTGATTCGGGTTGACCGTGACAGTACCAGTCGTGTGGGTAGCTGGCAAA
AAATCTATGACCGTATTCATCAAAACAAACCAACAATTTTACTCGGCACTCAAATGTTGGCAAAAGGTCATCATTTTCCA
CACGTAACTTTGGTTGCTATTTTAGATATTGATGCGGGCTTACTGAGTGTCGATATTCGTGCGCCAGAGCGTACTGCGCA
GTTAATTGTACAAGTCGCTGGTCGTGCAGGTCGTGGTGAACACAAAGGCCATGTTTATTTACAGACCTTAAGACCTGACC
ATCCATTACTCACCACACTCATCGAAAACGATTATCGGGCGGTTGCCAAACAAACTCTTGCGGAACGTAAAGTCGCATTG
CTGCCACCTTATCGTTATGCAGTACTGATACGTGCAGAGTCCAAAGATCGCGACTACACCTTACATTTCTTAAATGAAGC
GGCAGAACATTTACGCCAAATTGCAGGTGACATTGTTGATATCTGGGGGCCGATTCCAGCCCCTATGGAGCGTAAAGCTG
GACGCTACCGCGCCCACATGGTGATTTTATCTGCTGACCGTGCTCGCCTCCATTTTTACTTAAGACAATGGTGGTTACAA
TTGGTTCATGCACCAAGGCAGCATCAACTTCGACTCTCAATTGATGTTGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

98.113

100

0.981