NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	V1209_RS05795	Genome accession	NZ_CP143255
Coordinates	1302539..1305112 (+)	Length	857 a.a.
NCBI ID	WP_009875352.1	Uniprot ID	-
Organism	Actinobacillus pleuropneumoniae strain ZJNH2023
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1297539..1310112

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V1209_RS05775 (V1209_05765)	-	1298199..1299605 (+)	1407	WP_005601543.1	basic amino acid/polyamine antiporter	-
V1209_RS05780 (V1209_05770)	-	1299614..1300393 (+)	780	WP_009875351.1	hypothetical protein	-
V1209_RS05785 (V1209_05775)	argE	1300408..1301550 (+)	1143	WP_005597944.1	acetylornithine deacetylase	-
V1209_RS05790 (V1209_05780)	-	1301631..1302278 (-)	648	WP_005597946.1	OmpW family outer membrane protein	-
V1209_RS05795 (V1209_05785)	clpC	1302539..1305112 (+)	2574	WP_009875352.1	ATP-dependent chaperone ClpB	Regulator
V1209_RS05800 (V1209_05790)	arsB	1305169..1306170 (-)	1002	WP_005597950.1	ACR3 family arsenite efflux transporter	-
V1209_RS05805 (V1209_05795)	arsC	1306182..1306586 (-)	405	WP_005619479.1	arsenate reductase (glutaredoxin)	-
V1209_RS05810 (V1209_05800)	-	1306646..1306960 (-)	315	WP_005597954.1	metalloregulator ArsR/SmtB family transcription factor	-
V1209_RS05815 (V1209_05805)	aspA	1307088..1308515 (-)	1428	WP_237610113.1	aspartate ammonia-lyase	-
V1209_RS05820 (V1209_05810)	-	1308656..1308937 (-)	282	WP_011848529.1	DUF1294 domain-containing protein	-
V1209_RS05825 (V1209_05815)	-	1309011..1309859 (-)	849	WP_043880781.1	DMT family transporter	-

Sequence

Protein

Download Length: 857 a.a. Molecular weight: 95772.12 Da Isoelectric Point: 5.1976

                                >NTDB_id=843308 V1209_RS05795 WP_009875352.1 1302539..1305112(+) (clpC) [Actinobacillus pleuropneumoniae strain ZJNH2023]

MNFEKFTTKLQEALAEAQSLAIGKDNNYIEPAHLLYALVKQPDGSIAPLFTALNVQPQRILSELETILNRLPTVSGGTTQ

PSQQLIRLLNQCDKLAQQFGDSFISSELFVLAALDDNGDLGKLLKQFGLTKEKVNAAISQIRGGENVNNQNAEETRQALQ

KYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDM

GALIAGAKYRGEFEERLKAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQY

IEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSLR

MEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENA

RIEMDQARRENNFEKMSELQYGKIPALEKQLHEAVKREEEGSENQLLRTKVTEEEIAEVLSKATGIPVSKMMEGEKEKLL

RMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPDAMVRIDMSEFMEK

HSVSRLVGAPPGYVGYEEGGYLTEAARRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL

GSHLIQENPELDYAGMKEVVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTDAALD

HIGKAGFDPLFGARPLKRAIQQELENPLSQQILSGKLLPNSPVVVDYQNDRLSISNS

Nucleotide

Download Length: 2574 bp

                                >NTDB_id=843308 V1209_RS05795 WP_009875352.1 1302539..1305112(+) (clpC) [Actinobacillus pleuropneumoniae strain ZJNH2023]

ATGAATTTCGAAAAATTTACTACCAAATTGCAAGAAGCCCTTGCAGAAGCACAATCGTTAGCTATCGGAAAAGATAATAA

CTATATTGAACCGGCACATTTACTTTATGCGTTAGTCAAACAACCGGACGGCTCTATCGCCCCGCTATTTACTGCACTTA

ATGTACAACCGCAACGTATTTTGAGTGAATTAGAGACGATTTTAAACCGCTTACCGACCGTATCCGGCGGTACAACCCAA

CCGTCACAACAATTAATTCGCCTGTTAAATCAATGCGATAAACTAGCGCAGCAATTCGGTGACAGCTTTATTTCATCGGA

ATTATTCGTGCTTGCCGCACTGGACGATAACGGCGATTTAGGCAAATTATTAAAACAATTTGGCTTGACTAAAGAAAAAG

TAAACGCAGCCATCAGCCAAATTCGAGGAGGAGAAAACGTGAATAATCAAAACGCAGAAGAAACCAGACAGGCCCTTCAA

AAATATACTATCGATCTCACAGAAAGAGCCAAAGCCGGTAAATTAGATCCGGTCATCGGGCGTGATGAAGAAATCCGCCG

TGCAGTACAAGTTTTACAACGCCGTACTAAAAATAACCCGGTATTAATCGGTGAACCTGGGGTCGGTAAAACTGCGATCG

TAGAAGGCTTGGCACAACGTATCGTCAACGGCGAAGTGCCGGAAGGTTTAAAAAATAAACGTGTACTTTCTCTCGATATG

GGCGCATTAATTGCTGGTGCAAAATATCGCGGCGAATTTGAAGAACGTCTAAAAGCGGTACTTAACGAATTAGCCAAAGA

AGAAGGTCAGGTTATCTTATTTATTGATGAAATTCACACCATGGTCGGTGCGGGTAAAACAGACGGCGCAATGGATGCCG

GTAACTTACTCAAGCCGTCACTTGCTCGCGGCGAATTACATTGCGTTGGGGCAACTACGTTAGACGAATACCGCCAATAT

ATCGAAAAAGATGCGGCACTTGAACGTCGTTTCCAAAAAGTATTAGTGGACGAACCGACCGTTGAGGATACGATTGCAAT

TTTACGCGGCTTGAAAGAACGTTATGAAATTCATCACCACGTACAAATTACCGACCCGGCAATTGTCGCGGCGGCAACGC

TTTCGCACCGTTATATTTCCGACCGCCAATTACCGGATAAAGCGATCGATTTAATTGATGAAGCCGCATCCAGTTTACGT

ATGGAAATCGATTCTAAACCTGAGCCGTTGGATAAACTTGAACGCCGTATTATTCAACTTAAATTGGAACGCCAAGCGTT

ACAAAAAGAGGAAGATGAAGCAAGCCGCCAACGTCTTGCAAAATTAGATGAAGAATTGACCGCTCGCGAGCGTGAATATT

CCGAATTGGAAGAAGTTTGGAAAGCGGAGAAATCAGCATTACTCGGTACGCAACATATCAAAACCGAGTTAGAAAATGCC

CGTATCGAAATGGATCAGGCTCGCCGTGAAAATAATTTCGAGAAAATGTCCGAATTGCAATACGGTAAAATTCCGGCATT

GGAAAAACAATTACACGAAGCGGTAAAACGCGAGGAAGAAGGCAGTGAAAATCAACTGCTTCGTACCAAAGTCACCGAGG

AGGAAATCGCAGAAGTGCTTTCAAAAGCGACCGGTATTCCGGTTTCCAAAATGATGGAAGGCGAAAAAGAAAAACTATTG

CGTATGGAAGAAGTGTTACACAGCCGTGTCATCGGACAAAATGAAGCGGTAGAAGCGGTGGCAAATGCAATTCGCCGTAG

CCGTGCCGGATTGTCGGATCCGAATCGTCCGATCGGTTCGTTCTTATTCCTTGGCCCGACCGGGGTCGGTAAGACCGAAC

TTTGCAAAACCTTGGCGAATTTCCTATTCGATGATCCTGATGCGATGGTACGTATCGATATGTCGGAATTTATGGAAAAA

CACAGCGTTTCTCGTTTAGTCGGCGCACCTCCGGGCTATGTCGGTTATGAAGAAGGCGGTTATTTAACCGAAGCGGCTCG

CCGCCGTCCATATTCGGTAGTATTACTCGATGAAGTGGAAAAAGCGCACCCTGACGTGTTTAATATCTTGCTTCAAGTGT

TGGATGACGGTCGTTTAACCGACGGTCAAGGTCGTACGGTGGATTTTCGTAATACGGTAGTAATTATGACTTCAAACTTA

GGTTCACATTTAATCCAAGAAAATCCGGAATTAGATTATGCTGGAATGAAAGAAGTAGTGATGTCAGTGGTAGGACAACA

TTTCCGTCCTGAATTTATCAACCGTATTGATGAAACTGTGGTGTTCCACCCACTTGGTCAAGCACATATCCGTGCGATTG

CTCGCATTCAGTTACAACGTTTAATCGCTCGCCTTGCGGAACGCGGTTACGAAGTAACAGTTACCGATGCGGCATTAGAC

CATATCGGCAAAGCCGGCTTTGACCCGTTATTCGGTGCAAGACCGCTCAAACGTGCGATTCAGCAAGAGCTTGAAAATCC

GCTTTCACAACAGATCTTAAGCGGCAAATTATTACCGAACAGCCCAGTTGTGGTGGACTATCAAAATGACCGATTAAGCA

TTAGCAACAGCTAA