Detailed information NTG0843199

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VZW04_RS00845
• Genome accession: NZ_CP143092
• Coordinates: 178606..179589 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain EC190486
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 173606..184589

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VZW04_RS00825 (VZW04_00825)	dppA	174749..176356 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
VZW04_RS00835 (VZW04_00835)	dppB	176664..177683 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VZW04_RS00840 (VZW04_00840)	dppC	177693..178595 (+)	903	WP_126851353.1	dipeptide ABC transporter permease DppC	-
VZW04_RS00845 (VZW04_00845)	amiE	178606..179589 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
VZW04_RS00850 (VZW04_00850)	dppF	179586..180590 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VZW04_RS00855 (VZW04_00855)	yhjV	180620..181891 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
VZW04_RS00860 (VZW04_00860)	-	182367..182474 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
VZW04_RS00865 (VZW04_00865)	-	182849..182956 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
VZW04_RS00870 (VZW04_00870)	-	183332..183439 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
VZW04_RS00875 (VZW04_00875)	ldrD	183815..183922 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=843199 VZW04_RS00845 WP_001196486.1 178606..179589(+) (amiE) [Escherichia coli strain EC190486]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=843199 VZW04_RS00845 WP_001196486.1 178606..179589(+) (amiE) [Escherichia coli strain EC190486]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404