Detailed information NTG0843116

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VYI50_RS00975
• Genome accession: NZ_CP142956
• Coordinates: 218566..219549 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196481.1
• Uniprot ID: -
• Organism: Escherichia coli strain EC200461
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 213566..224549

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VYI50_RS00960 (VYI50_00960)	dppA	214866..216473 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
VYI50_RS00965 (VYI50_00965)	dppB	216624..217643 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VYI50_RS00970 (VYI50_00970)	dppC	217653..218555 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
VYI50_RS00975 (VYI50_00975)	amiE	218566..219549 (+)	984	WP_001196481.1	dipeptide ABC transporter ATP-binding protein	Regulator
VYI50_RS00980 (VYI50_00980)	dppF	219546..220550 (+)	1005	WP_000107033.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VYI50_RS00985 (VYI50_00985)	yhjV	220580..221851 (-)	1272	WP_022646242.1	aromatic amino acid transport family protein	-
VYI50_RS00990 (VYI50_00990)	-	222327..222434 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
VYI50_RS00995 (VYI50_00995)	-	222809..222916 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
VYI50_RS01000 (VYI50_01000)	-	223293..223400 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
VYI50_RS01005 (VYI50_01005)	-	223777..223884 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35798.31 Da
• Isoelectric Point: 6.5813

>NTDB_id=843116 VYI50_RS00975 WP_001196481.1 218566..219549(+) (amiE) [Escherichia coli strain EC200461]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAIAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=843116 VYI50_RS00975 WP_001196481.1 218566..219549(+) (amiE) [Escherichia coli strain EC200461]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATAGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGATAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGTCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCACTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407