Detailed information NTG0842947

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VYI52_RS00990
• Genome accession: NZ_CP142949
• Coordinates: 219230..220213 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain EC190329
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 214230..225213

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VYI52_RS00975 (VYI52_00975)	dppA	215530..217137 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
VYI52_RS00980 (VYI52_00980)	dppB	217288..218307 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VYI52_RS00985 (VYI52_00985)	dppC	218317..219219 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
VYI52_RS00990 (VYI52_00990)	amiE	219230..220213 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
VYI52_RS00995 (VYI52_00995)	dppF	220210..221214 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VYI52_RS01000 (VYI52_01000)	yhjV	221244..222515 (-)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
VYI52_RS01005 (VYI52_01005)	-	222991..223098 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
VYI52_RS01010 (VYI52_01010)	-	223475..223582 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
VYI52_RS01015 (VYI52_01015)	-	223958..224065 (+)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=842947 VYI52_RS00990 WP_001196487.1 219230..220213(+) (amiE) [Escherichia coli strain EC190329]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=842947 VYI52_RS00990 WP_001196487.1 219230..220213(+) (amiE) [Escherichia coli strain EC190329]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407