Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QRX25_RS11740 Genome accession   NZ_CP127224
Coordinates   2322414..2323214 (-) Length   266 a.a.
NCBI ID   WP_045510705.1    Uniprot ID   A0AAP7TAW5
Organism   Bacillus sp. L381     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2317414..2328214
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRX25_RS11705 (QRX25_11700) - 2317907..2318539 (+) 633 WP_212098433.1 helix-turn-helix domain-containing protein -
  QRX25_RS11710 (QRX25_11705) - 2318832..2318969 (+) 138 WP_014470646.1 hypothetical protein -
  QRX25_RS11715 (QRX25_11710) - 2319063..2320181 (+) 1119 WP_212101730.1 NADH-dependent flavin oxidoreductase -
  QRX25_RS11720 (QRX25_11715) - 2320308..2320520 (+) 213 WP_014470647.1 spore germination protein -
  QRX25_RS11725 (QRX25_11720) - 2320645..2320857 (+) 213 WP_013352823.1 spore germination protein -
  QRX25_RS11730 (QRX25_11725) alr 2321043..2322224 (+) 1182 WP_212098435.1 alanine racemase -
  QRX25_RS11735 (QRX25_11730) - 2322285..2322419 (+) 135 WP_258415239.1 hypothetical protein -
  QRX25_RS11740 (QRX25_11735) spo0A 2322414..2323214 (-) 801 WP_045510705.1 sporulation transcription factor Spo0A Regulator
  QRX25_RS11745 (QRX25_11740) spoIVB 2323495..2324775 (-) 1281 WP_115997624.1 SpoIVB peptidase -
  QRX25_RS11750 (QRX25_11745) recN 2324939..2326669 (-) 1731 WP_115997625.1 DNA repair protein RecN Machinery gene
  QRX25_RS11755 (QRX25_11750) argR 2326701..2327150 (-) 450 WP_013352828.1 transcriptional regulator ArgR -
  QRX25_RS11760 (QRX25_11755) - 2327247..2328092 (-) 846 WP_065522788.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29572.07 Da        Isoelectric Point: 6.3903

>NTDB_id=842812 QRX25_RS11740 WP_045510705.1 2322414..2323214(-) (spo0A) [Bacillus sp. L381]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELAKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=842812 QRX25_RS11740 WP_045510705.1 2322414..2323214(-) (spo0A) [Bacillus sp. L381]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTTTCTTTGTTTAAAGATAAAAATCCCGATGTGCTCG
TTTTAGATATTATTATGCCGCATCTGGACGGTCTTGCGGTTTTGGAGCGCCTCCGGGAATCAGAACTTGCGAAGCAGCCG
AATGTCATCATGCTGACGGCATTCGGTCAAGAAGACGTTACGAAAAAAGCCGTCGATTTAGGTGCGTCTTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGCGTCACACACCGTGCGC
CGTCCGCGCAAAGCAGCATCATCCGCAGTCAGCCTGAGCCGAAGCGGAAAAATCTTGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGCG
CCATCCGCCATGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGACTCCATTTCTTCGCTGTTCGGGTATACTGTAAGC
ATGACAAAAGCAAAACCAACCAATTCAGAGTTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCATA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97