Detailed information NTG0842783

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: QRX25_RS01985
• Genome accession: NZ_CP127224
• Coordinates: 420987..422135 (+)
• Length: 382 a.a.
• NCBI ID: WP_065980700.1
• Uniprot ID: -
• Organism: Bacillus sp. L381
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 415987..427135

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRX25_RS01965 (QRX25_01965)	-	416383..417066 (-)	684	WP_212100305.1	ABC transporter ATP-binding protein	-
QRX25_RS01970 (QRX25_01970)	-	417081..418517 (-)	1437	WP_212100307.1	ABC transporter permease	-
QRX25_RS01975 (QRX25_01975)	-	418730..419413 (+)	684	WP_013351002.1	response regulator transcription factor	-
QRX25_RS01980 (QRX25_01980)	-	419400..420827 (+)	1428	WP_212100309.1	HAMP domain-containing sensor histidine kinase	-
QRX25_RS01985 (QRX25_01985)	rapC	420987..422135 (+)	1149	WP_065980700.1	tetratricopeptide repeat protein	Regulator
QRX25_RS01990 (QRX25_01990)	phrC	422119..422238 (+)	120	WP_013351005.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
QRX25_RS01995 (QRX25_01995)	-	422386..422496 (-)	111	WP_065980701.1	YjcZ family sporulation protein	-
QRX25_RS02000 (QRX25_02000)	-	422591..423955 (-)	1365	WP_065980702.1	aspartate kinase	-
QRX25_RS02005 (QRX25_02005)	ceuB	424370..425323 (+)	954	WP_013351008.1	ABC transporter permease	Machinery gene
QRX25_RS02010 (QRX25_02010)	-	425313..426260 (+)	948	WP_065980704.1	iron chelate uptake ABC transporter family permease subunit	-
QRX25_RS02015 (QRX25_02015)	-	426254..427012 (+)	759	WP_065980705.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45564.84 Da
• Isoelectric Point: 5.0703

>NTDB_id=842783 QRX25_RS01985 WP_065980700.1 420987..422135(+) (rapC) [Bacillus sp. L381]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQNRID
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKDKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=842783 QRX25_RS01985 WP_065980700.1 420987..422135(+) (rapC) [Bacillus sp. L381]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAGATTAACGAGTGGTACCGATACATAAGAACATTCAGCGT
GCCGGATGCAGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTACTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTATTTGGAGCCGCTGGAGAAATTGAAAATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTCGATAACATAGATAACAGCCAGGCCGGGCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATATCAGCGATTACGTATTATAAACAGGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAGCGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATACAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGACGTTTTGAGCAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGAACCGCATCGAT
GAAGCCATACCGTACTTTGAACGGGCAGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTCCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGATAAAGCATCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTCGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571