Detailed information NTG0842760

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: VYI63_RS20375
• Genome accession: NZ_CP142930
• Coordinates: 4130783..4131988 (-)
• Length: 401 a.a.
• NCBI ID: WP_001161829.1
• Uniprot ID: A0A0H2Z2G4
• Organism: Escherichia coli strain B20123
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 4125783..4136988

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VYI63_RS20355 (VYI63_20355)	-	4125845..4127101 (+)	1257	WP_001259305.1	cytidylyltransferase domain-containing protein	-
VYI63_RS20360 (VYI63_20360)	neuC	4127098..4128273 (+)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
VYI63_RS20365 (VYI63_20365)	-	4128266..4129414 (+)	1149	WP_000197083.1	DUF6716 putative glycosyltransferase	-
VYI63_RS20370 (VYI63_20370)	-	4129404..4130633 (+)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
VYI63_RS20375 (VYI63_20375)	kpsS	4130783..4131988 (-)	1206	WP_001161829.1	capsule biosynthesis protein	Regulator
VYI63_RS20380 (VYI63_20380)	-	4132023..4134050 (-)	2028	WP_000579525.1	capsular polysaccharide biosynthesis protein	-
VYI63_RS20385 (VYI63_20385)	kdsB	4134047..4134787 (-)	741	WP_000030755.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
VYI63_RS20390 (VYI63_20390)	-	4134797..4136473 (-)	1677	WP_001331697.1	polysaccharide biosynthesis/export family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47976.30 Da
• Isoelectric Point: 10.0024

>NTDB_id=842760 VYI63_RS20375 WP_001161829.1 4130783..4131988(-) (kpsS) [Escherichia coli strain B20123]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEDGVNAYSSLPRDPDFYRKLPDMPTPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLSERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=842760 VYI63_RS20375 WP_001161829.1 4130783..4131988(-) (kpsS) [Escherichia coli strain B20123]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGCCGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GTCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGATGGTTACGGGATCTCCATCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGACGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTACGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGTATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAACGAGTTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTATATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTAAGTAAGG
AATATGGCTTAAGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

3D structure

• AlphaFold DB: A0A0H2Z2G4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	40.103	97.007	0.389