Detailed information NTG0842744

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VYI63_RS17265
• Genome accession: NZ_CP142930
• Coordinates: 3495158..3496141 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain B20123
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3490158..3501141

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VYI63_RS17250 (VYI63_17250)	dppA	3491458..3493065 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
VYI63_RS17255 (VYI63_17255)	dppB	3493216..3494235 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VYI63_RS17260 (VYI63_17260)	dppC	3494245..3495147 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
VYI63_RS17265 (VYI63_17265)	amiE	3495158..3496141 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
VYI63_RS17270 (VYI63_17270)	dppF	3496138..3497142 (+)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VYI63_RS17275 (VYI63_17275)	yhjV	3497172..3498443 (-)	1272	WP_001332306.1	aromatic amino acid transport family protein	-
VYI63_RS17280 (VYI63_17280)	-	3498919..3499026 (+)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
VYI63_RS17285 (VYI63_17285)	-	3499401..3499508 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
VYI63_RS17290 (VYI63_17290)	-	3499884..3499991 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=842744 VYI63_RS17265 WP_001196477.1 3495158..3496141(+) (amiE) [Escherichia coli strain B20123]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=842744 VYI63_RS17265 WP_001196477.1 3495158..3496141(+) (amiE) [Escherichia coli strain B20123]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404