Detailed information NTG0842649

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VYI62_RS15115
• Genome accession: NZ_CP142925
• Coordinates: 3058145..3059128 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain B20105
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3053145..3064128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VYI62_RS15090 (VYI62_15100)	-	3054293..3054400 (-)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-
VYI62_RS15095 (VYI62_15105)	-	3054776..3054883 (-)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
VYI62_RS15100 (VYI62_15110)	-	3055260..3055367 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
VYI62_RS15105 (VYI62_15115)	yhjV	3055843..3057114 (+)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
VYI62_RS15110 (VYI62_15120)	dppF	3057144..3058148 (-)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VYI62_RS15115 (VYI62_15125)	amiE	3058145..3059128 (-)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
VYI62_RS15120 (VYI62_15130)	dppC	3059139..3060041 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
VYI62_RS15125 (VYI62_15135)	dppB	3060051..3061070 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VYI62_RS15130 (VYI62_15140)	dppA	3061221..3062828 (-)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=842649 VYI62_RS15115 WP_001196487.1 3058145..3059128(-) (amiE) [Escherichia coli strain B20105]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=842649 VYI62_RS15115 WP_001196487.1 3058145..3059128(-) (amiE) [Escherichia coli strain B20105]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407