Detailed information NTG0842436

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VYI56_RS01050
• Genome accession: NZ_CP142915
• Coordinates: 212509..213492 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain B19374
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 207509..218492

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VYI56_RS01035 (VYI56_01035)	dppA	208809..210416 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
VYI56_RS01040 (VYI56_01040)	dppB	210567..211586 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VYI56_RS01045 (VYI56_01045)	dppC	211596..212498 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
VYI56_RS01050 (VYI56_01050)	amiE	212509..213492 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
VYI56_RS01055 (VYI56_01055)	dppF	213489..214502 (+)	1014	WP_000103582.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VYI56_RS01060 (VYI56_01060)	-	214727..215050 (+)	324	WP_000563102.1	helix-turn-helix domain-containing protein	-
VYI56_RS01065 (VYI56_01065)	-	215035..215346 (+)	312	WP_001346664.1	HipA N-terminal domain-containing protein	-
VYI56_RS01070 (VYI56_01070)	-	215346..216353 (+)	1008	WP_001262465.1	type II toxin-antitoxin system HipA family toxin	-
VYI56_RS01075 (VYI56_01075)	yhjV	216370..217641 (-)	1272	WP_001339917.1	aromatic amino acid transport family protein	-
VYI56_RS01080 (VYI56_01080)	-	218117..218224 (+)	108	WP_000170747.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=842436 VYI56_RS01050 WP_001196477.1 212509..213492(+) (amiE) [Escherichia coli strain B19374]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=842436 VYI56_RS01050 WP_001196477.1 212509..213492(+) (amiE) [Escherichia coli strain B19374]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAATCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGTCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404