Detailed information NTG0842212

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VR615_RS01640
• Genome accession: NZ_CP142843
• Coordinates: 340494..341477 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain SX45
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 335494..346477

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VR615_RS01615 (VR615_01620)	bcsF	335655..335846 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
VR615_RS01620 (VR615_01625)	bcsG	335843..337522 (+)	1680	WP_000191619.1	cellulose biosynthesis protein BcsG	-
VR615_RS01625 (VR615_01630)	ldrD	337609..337716 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
VR615_RS01630 (VR615_01635)	yhjV	338192..339463 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
VR615_RS01635 (VR615_01640)	dppF	339493..340497 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VR615_RS01640 (VR615_01645)	amiE	340494..341477 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
VR615_RS01645 (VR615_01650)	dppC	341488..342390 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
VR615_RS01650 (VR615_01655)	dppB	342400..343419 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VR615_RS01655 (VR615_01665)	dppA	343727..345334 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=842212 VR615_RS01640 WP_001196486.1 340494..341477(-) (amiE) [Escherichia coli strain SX45]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=842212 VR615_RS01640 WP_001196486.1 340494..341477(-) (amiE) [Escherichia coli strain SX45]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404