Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QMC72_RS20300 Genome accession   NZ_CP127095
Coordinates   3990075..3990866 (-) Length   263 a.a.
NCBI ID   WP_019257833.1    Uniprot ID   A0A2M8SXB5
Organism   Bacillus inaquosorum strain LBA001     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3985075..3995866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMC72_RS20265 (QMC72_20265) - 3985708..3986568 (-) 861 WP_232919343.1 alpha/beta hydrolase -
  QMC72_RS20270 (QMC72_20270) - 3986555..3986887 (-) 333 WP_284107461.1 SdpI family protein -
  QMC72_RS20275 (QMC72_20275) - 3986975..3987490 (-) 516 WP_100276105.1 SH3 domain-containing protein -
  QMC72_RS20280 (QMC72_20280) - 3987635..3987904 (-) 270 WP_003239709.1 YfhJ family protein -
  QMC72_RS20285 (QMC72_20285) - 3988029..3988181 (+) 153 WP_010330867.1 small, acid-soluble spore protein K -
  QMC72_RS20290 (QMC72_20290) - 3988415..3989608 (-) 1194 WP_003239711.1 MFS transporter -
  QMC72_RS20295 (QMC72_20295) - 3989746..3990066 (-) 321 WP_019257834.1 YfhH family protein -
  QMC72_RS20300 (QMC72_20300) recX 3990075..3990866 (-) 792 WP_019257833.1 recombination regulator RecX Regulator
  QMC72_RS20305 (QMC72_20305) - 3990955..3991866 (+) 912 WP_268275015.1 TIGR01777 family oxidoreductase -
  QMC72_RS20310 (QMC72_20310) - 3991921..3992031 (+) 111 WP_003223230.1 YfhE family protein -
  QMC72_RS20315 (QMC72_20315) - 3992098..3992289 (+) 192 WP_019257831.1 YfhD family protein -
  QMC72_RS20320 (QMC72_20320) - 3992329..3992913 (-) 585 WP_268274148.1 nitroreductase -
  QMC72_RS20325 (QMC72_20325) - 3993000..3993881 (-) 882 WP_060398213.1 PhzF family phenazine biosynthesis isomerase -
  QMC72_RS20330 (QMC72_20330) - 3993995..3995026 (-) 1032 WP_284107462.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30870.13 Da        Isoelectric Point: 6.6693

>NTDB_id=841719 QMC72_RS20300 WP_019257833.1 3990075..3990866(-) (recX) [Bacillus inaquosorum strain LBA001]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKEISAPVIAEVIHKLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=841719 QMC72_RS20300 WP_019257833.1 3990075..3990866(-) (recX) [Bacillus inaquosorum strain LBA001]
ATGCCATTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGGTTCAATATTTTTCTGGATGAAAAATACGCCTT
CAGCGTGGACGCGGACGTGCTCGTGAAATTTGAGCTCAAAAAGGGAAAAGAGCTTGATGACCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGATTTTTTATCCTACAGAATGAGGTCAACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAATCTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTCAACGACTATAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAG
AGCTGAGAGCGAAGGGGATCGACGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACCAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACAAAAGAACTCAAACAGCGCGCCCAGATGCA
GCTTCAGCGCAAGGGTTTCTCATTTGATGTCATCAGCGCGGCGCTGGAGCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATATCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTTAAACAATTTTTATTCCGTAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2M8SXB5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

96.958

100

0.97