Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QMC72_RS18765 Genome accession   NZ_CP127095
Coordinates   3711878..3712831 (-) Length   317 a.a.
NCBI ID   WP_019258048.1    Uniprot ID   A0A9Q4EVQ8
Organism   Bacillus inaquosorum strain LBA001     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3706878..3717831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMC72_RS18735 (QMC72_18735) appD 3707011..3707997 (-) 987 WP_003239306.1 oligopeptide ABC transporter ATP-binding protein AppD -
  QMC72_RS18740 (QMC72_18740) - 3708186..3708971 (-) 786 WP_019258051.1 DUF2268 domain-containing protein -
  QMC72_RS18745 (QMC72_18745) fabF 3709048..3710289 (-) 1242 WP_284106714.1 beta-ketoacyl-ACP synthase II -
  QMC72_RS18750 (QMC72_18750) fabH 3710312..3711250 (-) 939 WP_284106715.1 beta-ketoacyl-ACP synthase III -
  QMC72_RS18755 (QMC72_18755) - 3711415..3711642 (+) 228 WP_080010764.1 hypothetical protein -
  QMC72_RS18760 (QMC72_18760) comZ 3711672..3711863 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  QMC72_RS18765 (QMC72_18765) med 3711878..3712831 (-) 954 WP_019258048.1 transcriptional regulator Med Regulator
  QMC72_RS18770 (QMC72_18770) - 3712922..3713479 (-) 558 WP_133487934.1 hypothetical protein -
  QMC72_RS18775 (QMC72_18775) - 3713561..3714295 (-) 735 WP_133487936.1 hypothetical protein -
  QMC72_RS18780 (QMC72_18780) - 3714547..3714732 (+) 186 WP_003224551.1 YjzD family protein -
  QMC72_RS18785 (QMC72_18785) - 3714778..3714957 (-) 180 WP_003239319.1 YjzC family protein -
  QMC72_RS18790 (QMC72_18790) argF 3715059..3716003 (-) 945 WP_003239321.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35313.80 Da        Isoelectric Point: 4.5558

>NTDB_id=841711 QMC72_RS18765 WP_019258048.1 3711878..3712831(-) (med) [Bacillus inaquosorum strain LBA001]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTDEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVSEDYPDMEFVISNAEAKGDNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDSTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLKTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=841711 QMC72_RS18765 WP_019258048.1 3711878..3712831(-) (med) [Bacillus inaquosorum strain LBA001]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCAAAATACAATGTGGACGTCTACTATAAAGAAGGCGTTAAAACAGATGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGCGGGGCGTCAACCTTCTCTATGGCCATGGAAGTGAATATGCAGAGGTATTTAACTTGGTCAGCGAAGATTA
TCCAGATATGGAATTTGTCATTTCTAATGCGGAAGCGAAAGGTGATAATGTAACGAGTGTCCATTTCAGCGGCGAAGCAA
TGGGCTTTTTTGGAGGAATGACAGCTGCCCATATGTCGAAAACGAATCAGGTCGGCGTGATTGCTTCCTTTACGTGGCAG
CCAGAGGTTGACGGTTTTATCAAAGGTGCCAAATATGAAAACCCTGATATAGAAGTAAACACGAAATATACGGATCATTG
GGATGATGATTCGACAGCAGTGAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTTTATGCCATCGGCTATGTCACAGATCAATCAGATCTC
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATCGCTGAGCAATTCAACAAAGG
CACCCTTGAAGGCGGAGATCATTACTACGACCTGAAAACGGGAGTTGTTGAAATGGGAACATTCAGTCCGCTTGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACGTACAACAAAACAGGCGAACTGCCAAAAAATGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

97.792

100

0.978