Detailed information NTG0841702

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VVK16_RS06275
• Genome accession: NZ_CP142708
• Coordinates: 182450..183433 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain T28R
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 177450..188433

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VVK16_RS06260 (VVK16_06245)	dppA	178593..180200 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
VVK16_RS06265 (VVK16_06255)	dppB	180508..181527 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VVK16_RS06270 (VVK16_06260)	dppC	181537..182439 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
VVK16_RS06275 (VVK16_06265)	amiE	182450..183433 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
VVK16_RS06280 (VVK16_06270)	dppF	183430..184434 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VVK16_RS06285 (VVK16_06275)	yhjV	184464..185735 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
VVK16_RS06290 (VVK16_06280)	ldrD	186211..186318 (+)	108	WP_000141633.1	type I toxin-antitoxin system toxin Ldr family protein	-
VVK16_RS06295 (VVK16_06285)	bcsG	186405..188083 (-)	1679	Protein_170	cellulose biosynthesis protein BcsG	-
VVK16_RS06300 (VVK16_06290)	bcsF	188080..188271 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=841702 VVK16_RS06275 WP_001196486.1 182450..183433(+) (amiE) [Escherichia coli strain T28R]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=841702 VVK16_RS06275 WP_001196486.1 182450..183433(+) (amiE) [Escherichia coli strain T28R]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404