Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QMC72_RS16840 Genome accession   NZ_CP127095
Coordinates   3382016..3382600 (-) Length   194 a.a.
NCBI ID   WP_003238902.1    Uniprot ID   A0A9Q4HW25
Organism   Bacillus inaquosorum strain LBA001     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3377016..3387600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMC72_RS16815 (QMC72_16815) mobB 3377412..3377933 (-) 522 WP_284106597.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  QMC72_RS16820 (QMC72_16820) glp 3377894..3379186 (-) 1293 WP_284106598.1 gephyrin-like molybdotransferase Glp -
  QMC72_RS16825 (QMC72_16825) - 3379204..3380223 (-) 1020 WP_268274431.1 molybdopterin-synthase adenylyltransferase MoeB -
  QMC72_RS16830 (QMC72_16830) - 3380274..3380873 (-) 600 WP_119913785.1 molybdenum cofactor guanylyltransferase -
  QMC72_RS16835 (QMC72_16835) - 3381009..3381974 (+) 966 WP_119913784.1 sporulation protein -
  QMC72_RS16840 (QMC72_16840) rok 3382016..3382600 (-) 585 WP_003238902.1 transcriptional regulator Rok Regulator
  QMC72_RS16845 (QMC72_16845) - 3383052..3383510 (-) 459 WP_284106599.1 TlpA disulfide reductase family protein -
  QMC72_RS16850 (QMC72_16850) ahpA 3383580..3384122 (-) 543 WP_284106600.1 biofilm-specific peroxidase AhpA -
  QMC72_RS16855 (QMC72_16855) mscT 3384366..3385169 (+) 804 WP_003238907.1 small-conductance mechanosensitive channel protein MscT -
  QMC72_RS16860 (QMC72_16860) - 3385207..3385452 (-) 246 WP_003238909.1 YkuS family protein -
  QMC72_RS16865 (QMC72_16865) - 3385513..3386637 (-) 1125 WP_148981674.1 N-acetyldiaminopimelate deacetylase -
  QMC72_RS16870 (QMC72_16870) dapD 3386707..3387417 (-) 711 WP_003238912.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22145.10 Da        Isoelectric Point: 9.7169

>NTDB_id=841701 QMC72_RS16840 WP_003238902.1 3382016..3382600(-) (rok) [Bacillus inaquosorum strain LBA001]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEVKKDFRSERKTDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=841701 QMC72_RS16840 WP_003238902.1 3382016..3382600(-) (rok) [Bacillus inaquosorum strain LBA001]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTACGATTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATCGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAGTCAAAAAGGATTTCC
GTTCTGAACGAAAAACTGACTCTCTGCCGGTTCTTGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAACAGCAGTCTGTACAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCTGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCGAAAGCAGCTAAGCTGCGTGAAGCTGCCATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAAGGTGAAATCGAATCAGCTGA
ATCTGCAGAATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

98.413

97.423

0.959