Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   QMC72_RS13520 Genome accession   NZ_CP127095
Coordinates   2610073..2610213 (-) Length   46 a.a.
NCBI ID   WP_225516634.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain LBA001     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 2605073..2615213
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMC72_RS13515 (QMC72_13515) - 2608955..2610127 (-) 1173 Protein_2664 condensation domain-containing protein -
  QMC72_RS13520 (QMC72_13520) comS 2610073..2610213 (-) 141 WP_225516634.1 competence protein ComS Regulator
  QMC72_RS13525 (QMC72_13525) srfAB 2610257..2613349 (-) 3093 Protein_2666 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5274.07 Da        Isoelectric Point: 9.2422

>NTDB_id=841692 QMC72_RS13520 WP_225516634.1 2610073..2610213(-) (comS) [Bacillus inaquosorum strain LBA001]
MNRSSKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=841692 QMC72_RS13520 WP_225516634.1 2610073..2610213(-) (comS) [Bacillus inaquosorum strain LBA001]
TTGAACCGATCAAGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTTTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978