Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | QMC72_RS03140 | Genome accession | NZ_CP127095 |
| Coordinates | 588293..589330 (+) | Length | 345 a.a. |
| NCBI ID | WP_148981974.1 | Uniprot ID | - |
| Organism | Bacillus inaquosorum strain LBA001 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 583293..594330
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMC72_RS03120 (QMC72_03120) | - | 584132..585460 (-) | 1329 | WP_133486950.1 | hemolysin family protein | - |
| QMC72_RS03125 (QMC72_03125) | corA | 585604..586548 (+) | 945 | WP_284107350.1 | magnesium transporter CorA | - |
| QMC72_RS03130 (QMC72_03130) | - | 586611..587021 (+) | 411 | WP_268276765.1 | CBS domain-containing protein | - |
| QMC72_RS03135 (QMC72_03135) | comGA | 587236..588306 (+) | 1071 | WP_133486954.1 | competence protein ComGA | Machinery gene |
| QMC72_RS03140 (QMC72_03140) | comGB | 588293..589330 (+) | 1038 | WP_148981974.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| QMC72_RS03145 (QMC72_03145) | comGC | 589344..589640 (+) | 297 | WP_003236957.1 | comG operon protein ComGC | Machinery gene |
| QMC72_RS03150 (QMC72_03150) | comGD | 589630..590061 (+) | 432 | WP_284107349.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| QMC72_RS03155 (QMC72_03155) | comGE | 590045..590392 (+) | 348 | WP_133486963.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| QMC72_RS03160 (QMC72_03160) | comGF | 590418..590801 (+) | 384 | WP_133486965.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| QMC72_RS03165 (QMC72_03165) | comGG | 590802..591176 (+) | 375 | WP_284107348.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| QMC72_RS03170 (QMC72_03170) | - | 591247..591426 (+) | 180 | WP_003236949.1 | YqzE family protein | - |
| QMC72_RS03175 (QMC72_03175) | - | 591468..591794 (-) | 327 | WP_029316858.1 | YqzG/YhdC family protein | - |
| QMC72_RS03180 (QMC72_03180) | tapA | 592067..592831 (+) | 765 | WP_133486967.1 | amyloid fiber anchoring/assembly protein TapA | - |
| QMC72_RS03185 (QMC72_03185) | sipW | 592815..593387 (+) | 573 | WP_133487330.1 | signal peptidase I SipW | - |
| QMC72_RS03190 (QMC72_03190) | tasA | 593451..594236 (+) | 786 | WP_003236939.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39742.08 Da Isoelectric Point: 9.5329
>NTDB_id=841659 QMC72_RS03140 WP_148981974.1 588293..589330(+) (comGB) [Bacillus inaquosorum strain LBA001]
MKQIRKTWPLKDQAQLLKRLGEMTAGGYTLLDGLRLMELQMTKRQVADLTDTVIRLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQAIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILVALFAAGIGLYYWLVFKKKSPARQMLICVRIPLVGNLVRLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAAQVIERLKAGESIEAAICESPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILIVYLSMLLPMYQMMNQM
MKQIRKTWPLKDQAQLLKRLGEMTAGGYTLLDGLRLMELQMTKRQVADLTDTVIRLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQAIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILVALFAAGIGLYYWLVFKKKSPARQMLICVRIPLVGNLVRLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAAQVIERLKAGESIEAAICESPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILIVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=841659 QMC72_RS03140 WP_148981974.1 588293..589330(+) (comGB) [Bacillus inaquosorum strain LBA001]
ATGAAACAGATTAGGAAAACTTGGCCGTTAAAGGATCAAGCCCAGTTATTAAAGCGTCTCGGTGAAATGACGGCGGGCGG
GTATACGCTTCTGGATGGATTACGCCTGATGGAACTCCAGATGACTAAAAGGCAGGTGGCTGACTTGACTGACACAGTCA
TTCGTTTGAGGGAAGGGGCGCCGTTTTATCAAGTATTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGTTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTTCGATATCCGCTTTTCCTCATCTTCACAGTCGCTGTCATGTTTTATATGTTACAGGCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACAGACATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTCTAGTGGCTCTTTTTGCAGCAGGTATCGGCCTTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCTAGGCAAATGCTTATTTGTGTCAGGATTCCTTTGGTTGGAAACCTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAACGCATTTAAACACCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGCACAAGTGATTGAACGGTTAAAAGCTGGTGAATCAATTGAAGCCGCTATTTG
TGAAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTAAGCGGCCGCCTGGATCGGGAGCTTT
TCACATACAGCCAGTTCATACTTCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCTATGATTTAT
GGATTTGTTGCAGCGATGATCTTAATCGTGTATTTATCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAACAGATTAGGAAAACTTGGCCGTTAAAGGATCAAGCCCAGTTATTAAAGCGTCTCGGTGAAATGACGGCGGGCGG
GTATACGCTTCTGGATGGATTACGCCTGATGGAACTCCAGATGACTAAAAGGCAGGTGGCTGACTTGACTGACACAGTCA
TTCGTTTGAGGGAAGGGGCGCCGTTTTATCAAGTATTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGTTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGGGTGCTTCGATATCCGCTTTTCCTCATCTTCACAGTCGCTGTCATGTTTTATATGTTACAGGCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACAGACATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTCTAGTGGCTCTTTTTGCAGCAGGTATCGGCCTTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCTAGGCAAATGCTTATTTGTGTCAGGATTCCTTTGGTTGGAAACCTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAACGCATTTAAACACCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGCACAAGTGATTGAACGGTTAAAAGCTGGTGAATCAATTGAAGCCGCTATTTG
TGAAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTAAGCGGCCGCCTGGATCGGGAGCTTT
TCACATACAGCCAGTTCATACTTCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCTATGATTTAT
GGATTTGTTGCAGCGATGATCTTAATCGTGTATTTATCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
93.498 |
93.623 |
0.875 |