Detailed information NTG0841623

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VR553_RS01025
• Genome accession: NZ_CP142680
• Coordinates: 216903..217886 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain FG31-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 211903..222886

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VR553_RS01010 (VR553_00990)	dppA	213046..214653 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
VR553_RS01015 (VR553_01000)	dppB	214961..215980 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VR553_RS01020 (VR553_01005)	dppC	215990..216892 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
VR553_RS01025 (VR553_01010)	amiE	216903..217886 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
VR553_RS01030 (VR553_01015)	dppF	217883..218887 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VR553_RS01035 (VR553_01020)	yhjV	218917..220188 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
VR553_RS01040 (VR553_01025)	-	220664..220771 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
VR553_RS01045 (VR553_01030)	-	221147..221254 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
VR553_RS01050 (VR553_01035)	ldrD	221630..221737 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=841623 VR553_RS01025 WP_001196486.1 216903..217886(+) (amiE) [Escherichia coli strain FG31-1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=841623 VR553_RS01025 WP_001196486.1 216903..217886(+) (amiE) [Escherichia coli strain FG31-1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGTTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404