Detailed information NTG0841569

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QQW97_RS19400
• Genome accession: NZ_CP127089
• Coordinates: 3643658..3644803 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain KK026
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3638658..3649803

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQW97_RS19375 (QQW97_19355)	albF	3638674..3639954 (+)	1281	WP_003242974.1	M16 family metallopeptidase	-
QQW97_RS19380 (QQW97_19360)	albG	3639951..3640652 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
QQW97_RS19385 (QQW97_19365)	ywhL	3640658..3642034 (-)	1377	WP_003244415.1	YncE family protein	-
QQW97_RS19390 (QQW97_19370)	ywhK	3642073..3643428 (-)	1356	WP_003227552.1	YncE family protein	-
QQW97_RS19395	-	3643425..3643655 (-)	231	WP_009968328.1	hypothetical protein	-
QQW97_RS19400 (QQW97_19375)	rapF	3643658..3644803 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
QQW97_RS19405 (QQW97_19380)	phrF	3644787..3644906 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
QQW97_RS19410 (QQW97_19385)	ywhH	3645005..3645478 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
QQW97_RS19415 (QQW97_19390)	speB	3645510..3646382 (-)	873	WP_003227545.1	agmatinase	-
QQW97_RS19420 (QQW97_19395)	speE	3646443..3647273 (-)	831	WP_003227543.1	spermidine synthase	-
QQW97_RS19425 (QQW97_19400)	pbpG	3647475..3649550 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=841569 QQW97_RS19400 WP_003227549.1 3643658..3644803(+) (rapF) [Bacillus subtilis strain KK026]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=841569 QQW97_RS19400 WP_003227549.1 3643658..3644803(+) (rapF) [Bacillus subtilis strain KK026]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572