Detailed information NTG0841541

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VR550_RS00870
• Genome accession: NZ_CP142677
• Coordinates: 175498..176481 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain FG92-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 170498..181481

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VR550_RS00850 (VR550_00840)	dppA	171641..173248 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
VR550_RS00855	-	173311..173538 (-)	228	WP_001300936.1	hypothetical protein	-
VR550_RS00860 (VR550_00850)	dppB	173556..174575 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VR550_RS00865 (VR550_00855)	dppC	174585..175487 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
VR550_RS00870 (VR550_00860)	amiE	175498..176481 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
VR550_RS00875 (VR550_00865)	dppF	176478..177482 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VR550_RS00880 (VR550_00870)	yhjV	177512..178783 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
VR550_RS00885 (VR550_00875)	ldrD	179259..179366 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
VR550_RS00890 (VR550_00880)	bcsG	179453..181132 (-)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
VR550_RS00895 (VR550_00885)	bcsF	181129..181320 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=841541 VR550_RS00870 WP_001196486.1 175498..176481(+) (amiE) [Escherichia coli strain FG92-1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=841541 VR550_RS00870 WP_001196486.1 175498..176481(+) (amiE) [Escherichia coli strain FG92-1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404