Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   VP459_RS11935 Genome accession   NZ_CP142600
Coordinates   2447180..2447920 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain M19060305     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2442180..2452920
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VP459_RS11910 (VP459_11915) yhaM 2442598..2443539 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  VP459_RS11915 (VP459_11920) - 2443660..2444622 (-) 963 WP_000782119.1 foldase protein PrsA -
  VP459_RS11920 (VP459_11925) - 2444827..2445384 (-) 558 WP_000477959.1 DUF3267 domain-containing protein -
  VP459_RS11925 (VP459_11930) - 2446117..2446482 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  VP459_RS11930 (VP459_11935) - 2446624..2447046 (-) 423 WP_000004981.1 HIT family protein -
  VP459_RS11935 (VP459_11940) pptA 2447180..2447920 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein Regulator
  VP459_RS11940 (VP459_11945) - 2447913..2449136 (+) 1224 WP_001245754.1 ABC transporter permease -
  VP459_RS11945 (VP459_11950) traP 2449260..2449763 (-) 504 WP_000737984.1 signal transduction protein TRAP -
  VP459_RS11950 (VP459_11955) - 2449949..2450035 (+) 87 WP_031875110.1 hypothetical protein -
  VP459_RS11955 (VP459_11960) hemE 2450025..2451062 (+) 1038 WP_000233542.1 uroporphyrinogen decarboxylase -
  VP459_RS11960 (VP459_11965) hemH 2451120..2452043 (+) 924 WP_000162881.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=841415 VP459_RS11935 WP_000216874.1 2447180..2447920(+) (pptA) [Staphylococcus aureus strain M19060305]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=841415 VP459_RS11935 WP_000216874.1 2447180..2447920(+) (pptA) [Staphylococcus aureus strain M19060305]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545