Detailed information NTG0841276

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VT654_RS00955
• Genome accession: NZ_CP142590
• Coordinates: 199602..200585 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain 64
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 194602..205585

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VT654_RS00940 (VT654_00940)	dppA	195902..197509 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
VT654_RS00945 (VT654_00945)	dppB	197660..198679 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VT654_RS00950 (VT654_00950)	dppC	198689..199591 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
VT654_RS00955 (VT654_00955)	amiE	199602..200585 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
VT654_RS00960 (VT654_00960)	dppF	200582..201586 (+)	1005	WP_000107035.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VT654_RS00965 (VT654_00965)	yhjV	201616..202887 (-)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
VT654_RS00970 (VT654_00970)	-	203363..203470 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
VT654_RS00975 (VT654_00975)	-	203846..203953 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
VT654_RS00980 (VT654_00980)	-	204329..204436 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=841276 VT654_RS00955 WP_001196496.1 199602..200585(+) (amiE) [Escherichia coli strain 64]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=841276 VT654_RS00955 WP_001196496.1 199602..200585(+) (amiE) [Escherichia coli strain 64]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401