Detailed information NTG0841020

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: QQF37_RS01065
• Genome accession: NZ_CP126986
• Coordinates: 235566..236714 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain MC2S-6
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 230566..241714

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QQF37_RS01045 (QQF37_01045)	-	230969..231652 (-)	684	WP_032872874.1	ABC transporter ATP-binding protein	-
QQF37_RS01050 (QQF37_01050)	-	231667..233097 (-)	1431	WP_032872876.1	ABC transporter permease	-
QQF37_RS01055 (QQF37_01055)	-	233310..233993 (+)	684	WP_032872879.1	response regulator transcription factor	-
QQF37_RS01060 (QQF37_01060)	-	233980..235413 (+)	1434	WP_161503657.1	HAMP domain-containing sensor histidine kinase	-
QQF37_RS01065 (QQF37_01065)	rapC	235566..236714 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
QQF37_RS01070 (QQF37_01070)	phrC	236698..236817 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
QQF37_RS01075 (QQF37_01075)	-	236968..237063 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
QQF37_RS01080 (QQF37_01080)	-	237158..238522 (-)	1365	WP_007609394.1	aspartate kinase	-
QQF37_RS01085 (QQF37_01085)	ceuB	238936..239889 (+)	954	WP_032872883.1	ABC transporter permease	Machinery gene
QQF37_RS01090 (QQF37_01090)	-	239879..240826 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
QQF37_RS01095 (QQF37_01095)	-	240820..241578 (+)	759	WP_007609404.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=841020 QQF37_RS01065 WP_007410270.1 235566..236714(+) (rapC) [Bacillus velezensis strain MC2S-6]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=841020 QQF37_RS01065 WP_007410270.1 235566..236714(+) (rapC) [Bacillus velezensis strain MC2S-6]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568