Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   VKP34_RS05805 Genome accession   NZ_CP142358
Coordinates   1140564..1141226 (-) Length   220 a.a.
NCBI ID   WP_002995626.1    Uniprot ID   A0A0H2UV22
Organism   Streptococcus pyogenes strain 6702-99     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1135564..1146226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP34_RS09140 - 1136127..1136360 (-) 234 WP_002983979.1 hypothetical protein -
  VKP34_RS05790 (VKP34_05790) sodA 1136527..1137132 (-) 606 WP_002983977.1 superoxide dismutase SodA -
  VKP34_RS05795 (VKP34_05795) holA 1137229..1138269 (-) 1041 WP_011054659.1 DNA polymerase III subunit delta -
  VKP34_RS05800 (VKP34_05800) comEC/celB 1138340..1140583 (-) 2244 WP_002995623.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  VKP34_RS05805 (VKP34_05805) comEA/celA/cilE 1140564..1141226 (-) 663 WP_002995626.1 ComEA family DNA-binding protein Machinery gene
  VKP34_RS05810 (VKP34_05810) - 1141426..1142166 (-) 741 WP_168642177.1 lysophospholipid acyltransferase family protein -
  VKP34_RS05815 (VKP34_05815) - 1142284..1143060 (+) 777 WP_002994360.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  VKP34_RS05820 (VKP34_05820) - 1143050..1143328 (+) 279 WP_049519961.1 GIY-YIG nuclease family protein -
  VKP34_RS05825 (VKP34_05825) - 1143352..1145352 (-) 2001 WP_136112284.1 potassium transporter Kup -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 24623.45 Da        Isoelectric Point: 6.7451

>NTDB_id=840897 VKP34_RS05805 WP_002995626.1 1140564..1141226(-) (comEA/celA/cilE) [Streptococcus pyogenes strain 6702-99]
MLDELLIKGKSFLRERYFLPYLISLLLGLFLILSFSFLFWGNRQSKAAVPALREISPVKQQVSEEKKEIQEDNSILVDLK
GAVQKEGVYKLTASSRVRDVIELAGGLTSEADKHAINFAEKLTDEQVVYVPKQGEEISVLPRSLVSGKKETASKDQSKVH
INKASLEELQHIPGIGAKRAQDIIDMRDKLGGFKALEDLRQVSGIGEKTLEKLKDDIFLD

Nucleotide


Download         Length: 663 bp        

>NTDB_id=840897 VKP34_RS05805 WP_002995626.1 1140564..1141226(-) (comEA/celA/cilE) [Streptococcus pyogenes strain 6702-99]
ATGTTAGACGAATTATTAATTAAAGGAAAATCGTTTTTGAGAGAGCGGTATTTTCTGCCATACCTAATTAGTCTTTTATT
AGGACTTTTTCTAATACTAAGCTTCAGTTTTTTGTTCTGGGGAAATAGGCAGAGCAAGGCAGCCGTTCCTGCTTTGAGAG
AAATATCGCCTGTGAAACAGCAGGTTAGTGAAGAAAAAAAGGAAATTCAAGAAGATAACAGTATTTTAGTGGATTTAAAA
GGCGCCGTACAAAAAGAGGGAGTTTATAAGCTAACTGCTAGCAGTCGTGTGCGAGATGTCATTGAACTAGCTGGAGGCCT
AACTTCAGAAGCTGATAAACATGCTATTAATTTTGCAGAAAAACTAACTGATGAGCAAGTTGTTTATGTACCTAAACAAG
GAGAAGAGATTTCTGTGCTACCAAGGTCATTAGTTTCTGGTAAAAAAGAAACTGCCAGCAAGGATCAGTCAAAGGTTCAT
ATTAATAAGGCCAGCTTAGAAGAACTACAACATATCCCAGGTATTGGTGCTAAAAGAGCTCAGGATATTATTGATATGAG
AGATAAGTTAGGTGGTTTTAAAGCGTTAGAAGATCTCCGTCAGGTTTCGGGGATTGGCGAAAAAACGCTCGAGAAATTAA
AAGATGACATTTTCTTGGACTAA

Domains

Predicted by InterProScan.

SLBB domain (SLBB)

(77-130)

Helix-hairpin-helix motif (HHH_3)

(156-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UV22

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

42.995

94.091

0.405