Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   F6I26_RS01740 Genome accession   NZ_CP126961
Coordinates   318929..319660 (+) Length   243 a.a.
NCBI ID   WP_024052174.1    Uniprot ID   -
Organism   Streptococcus anginosus strain UMB4708     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 313929..324660
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6I26_RS01710 (F6I26_001710) - 314503..315942 (+) 1440 WP_024052180.1 NCS2 family permease -
  F6I26_RS01715 (F6I26_001715) tsaE 316029..316469 (+) 441 WP_024052179.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  F6I26_RS01720 (F6I26_001720) - 316462..316983 (+) 522 WP_024052178.1 GNAT family N-acetyltransferase -
  F6I26_RS01725 (F6I26_001725) - 316991..318106 (+) 1116 WP_024052177.1 LCP family protein -
  F6I26_RS01730 (F6I26_001730) - 318153..318440 (-) 288 WP_024052176.1 hypothetical protein -
  F6I26_RS01735 (F6I26_001735) - 318450..318860 (-) 411 WP_024052175.1 HIT family protein -
  F6I26_RS01740 (F6I26_001740) pptA 318929..319660 (+) 732 WP_024052174.1 ABC transporter ATP-binding protein Regulator
  F6I26_RS01745 (F6I26_001745) pptB 319657..320703 (+) 1047 WP_024052173.1 ABC transporter permease Regulator
  F6I26_RS01750 (F6I26_001750) - 320754..321551 (+) 798 WP_070241539.1 phosphotransferase family protein -
  F6I26_RS01755 (F6I26_001755) trmB 321548..322183 (+) 636 WP_003033795.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  F6I26_RS01760 (F6I26_001760) - 322812..323501 (+) 690 WP_042754037.1 VIT family protein -
  F6I26_RS01765 (F6I26_001765) rimP 323770..324240 (+) 471 WP_306806738.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26900.57 Da        Isoelectric Point: 4.7336

>NTDB_id=840769 F6I26_RS01740 WP_024052174.1 318929..319660(+) (pptA) [Streptococcus anginosus strain UMB4708]
MLEIKGLIGGYVNIPVLKDISFTVGNGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDSPTAYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVEQKVAFARVEKLLTMFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLEDEKVKGKSILMSTHVLDSAEKMCDSFVILHKGEIRAKGNLAELRAEFAMPEASLNDIYLVLTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=840769 F6I26_RS01740 WP_024052174.1 318929..319660(+) (pptA) [Streptococcus anginosus strain UMB4708]
ATGTTAGAAATAAAAGGGCTTATAGGGGGCTATGTGAATATCCCTGTTTTAAAAGACATCAGTTTCACAGTAGGAAATGG
GGAACTGGTGGGGTTGATTGGTTTGAATGGTGCGGGTAAATCCACTACAATCAATGAAATTATCGGACTTTTAACTCCTT
ATAAAGGTGAAATTTTAATTGACGGTGCCAAACTGCAAGATAGTCCTACGGCTTATCGTAAGAAAATTGGTTTTATTCCG
GAAACACCTAGTTTGTATGAGGAATTAACGCTGCGCGAGCATATTGAAACGGTTGCTATGGCTTATGATGTGGAGCAAAA
GGTGGCTTTTGCACGCGTGGAAAAATTATTGACGATGTTTCGCTTGAAAGAAAAATTAGATTGGTTTCCGGTGCATTTTT
CTAAGGGGATGAAGCAAAAAGTCATGATTATCTGTGCATTTGTGGTTGACCCCAGCCTTTTTATCGTTGATGAACCATTT
TTAGGACTTGATCCAGTTGCCATTGCTGACTTGATAGAGCTTTTGGAGGATGAAAAGGTAAAAGGCAAGTCAATTCTTAT
GAGTACGCATGTGCTGGATTCGGCAGAAAAGATGTGTGATTCATTCGTGATATTGCATAAGGGAGAAATCCGAGCTAAAG
GCAATTTAGCAGAATTACGAGCAGAATTTGCCATGCCAGAAGCTAGTCTCAATGACATTTATCTAGTTTTGACAGAAGAG
GCGAGCTTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

71.967

98.354

0.708
  pptA Streptococcus salivarius strain HSISS4

71.548

98.354

0.704