Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   VKP54_RS01245 Genome accession   NZ_CP142356
Coordinates   217284..217733 (+) Length   149 a.a.
NCBI ID   WP_002986120.1    Uniprot ID   A0A0H2UT44
Organism   Streptococcus pyogenes strain CT95-157     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 212284..222733
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP54_RS01225 (VKP54_01225) - 214170..214325 (+) 156 WP_168643142.1 hypothetical protein -
  VKP54_RS01230 (VKP54_01230) - 214353..214940 (+) 588 WP_111711339.1 rhomboid family intramembrane serine protease -
  VKP54_RS01235 (VKP54_01235) galU 215040..215939 (-) 900 WP_002986125.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  VKP54_RS01240 (VKP54_01240) - 215972..216988 (-) 1017 WP_002986123.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  VKP54_RS01245 (VKP54_01245) rcrR 217284..217733 (+) 450 WP_002986120.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  VKP54_RS01250 (VKP54_01250) - 217726..219432 (+) 1707 WP_011284484.1 ABC transporter ATP-binding protein -
  VKP54_RS01255 (VKP54_01255) - 219435..221219 (+) 1785 WP_002992923.1 ABC transporter ATP-binding protein -
  VKP54_RS01260 (VKP54_01260) - 221337..222104 (+) 768 WP_002986113.1 epoxyqueuosine reductase QueH -
  VKP54_RS01265 (VKP54_01265) - 222214..222660 (+) 447 WP_002986111.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17343.25 Da        Isoelectric Point: 9.5568

>NTDB_id=840668 VKP54_RS01245 WP_002986120.1 217284..217733(+) (rcrR) [Streptococcus pyogenes strain CT95-157]
MSQVIGDLRELIHQIEQISDEIAKKYDVEHLAGPQGYVLVFLAKHQNQEIFVKDIEKQLRISKSVASHLVKRMVKNGFIN
VMPSQVDKRYKQVVLAQVGRDKLPLLRECRKDIEHYFLKEITKEELLTAKKVIEQLKQNMLTYKGDNDA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=840668 VKP54_RS01245 WP_002986120.1 217284..217733(+) (rcrR) [Streptococcus pyogenes strain CT95-157]
ATGTCACAAGTGATAGGTGATTTACGTGAATTGATACATCAAATCGAACAAATTAGTGATGAGATTGCAAAAAAATATGA
TGTAGAACATCTAGCAGGTCCTCAAGGTTATGTTCTTGTTTTTTTAGCTAAACACCAAAATCAAGAAATATTTGTCAAAG
ATATTGAAAAACAACTTCGTATCTCAAAGTCAGTTGCTAGTCATTTAGTGAAACGTATGGTCAAAAATGGGTTTATCAAT
GTGATGCCTTCCCAAGTGGATAAGCGTTATAAGCAAGTAGTGTTAGCGCAGGTTGGTAGAGATAAATTGCCTTTGTTGCG
GGAGTGTCGTAAGGATATCGAGCACTATTTTTTAAAAGAAATTACAAAAGAAGAGTTGCTGACAGCGAAAAAAGTAATTG
AACAGCTCAAGCAAAATATGCTAACTTATAAAGGAGACAACGATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UT44

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

47.143

93.96

0.443