Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   VKP53_RS06740 Genome accession   NZ_CP142354
Coordinates   1365003..1365812 (-) Length   269 a.a.
NCBI ID   WP_023612763.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 6745-99     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1360003..1370812
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP53_RS06730 (VKP53_06730) smc 1360338..1363877 (-) 3540 WP_021733163.1 chromosome segregation protein SMC -
  VKP53_RS06735 (VKP53_06735) rnc 1363878..1364570 (-) 693 WP_002990670.1 ribonuclease III -
  VKP53_RS06740 (VKP53_06740) vicX 1365003..1365812 (-) 810 WP_023612763.1 MBL fold metallo-hydrolase Regulator
  VKP53_RS06745 (VKP53_06745) vicK 1365816..1367168 (-) 1353 WP_326674734.1 cell wall metabolism sensor histidine kinase VicK Regulator
  VKP53_RS06750 (VKP53_06750) yycF 1367161..1367871 (-) 711 WP_002985645.1 response regulator YycF -
  VKP53_RS06755 (VKP53_06755) - 1368033..1369067 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  VKP53_RS06760 (VKP53_06760) - 1369123..1370370 (-) 1248 WP_047235203.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30081.18 Da        Isoelectric Point: 5.5314

>NTDB_id=840532 VKP53_RS06740 WP_023612763.1 1365003..1365812(-) (vicX) [Streptococcus pyogenes strain 6745-99]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=840532 VKP53_RS06740 WP_023612763.1 1365003..1365812(-) (vicX) [Streptococcus pyogenes strain 6745-99]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGTAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
GTCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762