Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   MJ90_RS15360 Genome accession   NZ_CP126912
Coordinates   3024611..3025240 (-) Length   209 a.a.
NCBI ID   WP_000839162.1    Uniprot ID   A0A2T3RS91
Organism   Escherichia albertii strain 2011C-4180     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3019611..3030240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MJ90_RS15345 (MJ90_15340) helD 3019853..3021907 (-) 2055 WP_025237257.1 DNA helicase IV -
  MJ90_RS15350 (MJ90_15345) - 3022030..3022476 (+) 447 WP_001261228.1 YccF domain-containing protein -
  MJ90_RS15355 (MJ90_15350) yccS 3022486..3024651 (+) 2166 WP_273764772.1 YccS family putative transporter -
  MJ90_RS15360 (MJ90_15355) sxy/tfoX 3024611..3025240 (-) 630 WP_000839162.1 TfoX/Sxy family DNA transformation protein Regulator
  MJ90_RS15365 (MJ90_15360) sulA 3025458..3025967 (+) 510 WP_000288703.1 SOS-induced cell division inhibitor SulA -
  MJ90_RS15370 (MJ90_15365) ompA 3026323..3027375 (+) 1053 WP_024164823.1 porin OmpA -
  MJ90_RS15375 (MJ90_15370) matP 3027451..3027903 (-) 453 WP_000877164.1 macrodomain Ter protein MatP -
  MJ90_RS15380 (MJ90_15375) - 3028089..3029849 (+) 1761 WP_103053446.1 Lon protease family protein -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 24291.21 Da        Isoelectric Point: 9.0264

>NTDB_id=840450 MJ90_RS15360 WP_000839162.1 3024611..3025240(-) (sxy/tfoX) [Escherichia albertii strain 2011C-4180]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVNDTVFAMVADGELYLRACEQSVQYCVKHPPVWLTYKKCGRPVTLN
YYRVDESLWRNQQKLVRLSKYSLDAALKEKCTRNNLQRLKDLPNMSYHLEAILGEVGIKDVRTLRILGAKMCWLRLRQHN
SQVTEKILFMLEGAIIDIHEAALPVARRQELAEWAESIVPKPEFPTEPE

Nucleotide


Download         Length: 630 bp        

>NTDB_id=840450 MJ90_RS15360 WP_000839162.1 3024611..3025240(-) (sxy/tfoX) [Escherichia albertii strain 2011C-4180]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAGTCACAAGAATACCTTGCAACGTTAGGCACCATTGAATATCGATCGCT
GTTTGGCAGTTACAGTTTGACGGTTAACGATACGGTATTTGCGATGGTTGCTGATGGTGAGTTGTATCTACGGGCTTGTG
AACAAAGCGTACAGTACTGTGTAAAACATCCGCCAGTCTGGCTGACATATAAAAAGTGCGGCCGACCCGTGACTCTCAAT
TACTACCGGGTTGATGAAAGTCTATGGCGTAACCAACAGAAATTAGTTCGCTTGTCGAAATATTCCCTGGATGCTGCGCT
GAAAGAGAAATGTACGCGCAACAATCTCCAGCGACTGAAAGATTTGCCGAATATGTCTTATCACCTGGAGGCGATTCTCG
GTGAGGTGGGGATCAAGGATGTGCGGACTTTACGGATCCTTGGCGCAAAGATGTGCTGGTTGCGACTACGTCAGCATAAT
AGCCAGGTGACGGAGAAGATCTTATTCATGCTTGAAGGCGCAATTATTGATATTCATGAAGCAGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCTGAATGGGCTGAATCTATTGTGCCGAAACCGGAGTTTCCGACGGAACCTGAGTAA

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2T3RS91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

90.431

100

0.904