Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   VKP38_RS06905 Genome accession   NZ_CP142352
Coordinates   1380826..1381635 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   A0A0H2UTH0
Organism   Streptococcus pyogenes strain 2907-97     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1375826..1386635
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP38_RS06895 (VKP38_06895) smc 1376162..1379701 (-) 3540 WP_111674856.1 chromosome segregation protein SMC -
  VKP38_RS06900 (VKP38_06900) rnc 1379702..1380394 (-) 693 WP_002985639.1 ribonuclease III -
  VKP38_RS06905 (VKP38_06905) vicX 1380826..1381635 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  VKP38_RS06910 (VKP38_06910) vicK 1381639..1382991 (-) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  VKP38_RS06915 (VKP38_06915) yycF 1382984..1383694 (-) 711 WP_002985645.1 response regulator YycF -
  VKP38_RS06920 (VKP38_06920) - 1383856..1384890 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  VKP38_RS06925 (VKP38_06925) - 1384946..1386193 (-) 1248 WP_023611593.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=840339 VKP38_RS06905 WP_002985641.1 1380826..1381635(-) (vicX) [Streptococcus pyogenes strain 2907-97]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=840339 VKP38_RS06905 WP_002985641.1 1380826..1381635(-) (vicX) [Streptococcus pyogenes strain 2907-97]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UTH0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758