Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   VKP38_RS05405 Genome accession   NZ_CP142352
Coordinates   1068474..1068950 (-) Length   158 a.a.
NCBI ID   WP_002984880.1    Uniprot ID   A0A0H2UU18
Organism   Streptococcus pyogenes strain 2907-97     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1063474..1073950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP38_RS05390 (VKP38_05390) fbp54 1064287..1065939 (+) 1653 WP_032464331.1 Rqc2 family fibronectin-binding protein Fbp54 -
  VKP38_RS05395 (VKP38_05395) - 1065998..1067245 (-) 1248 WP_063629099.1 tetratricopeptide repeat protein -
  VKP38_RS05400 (VKP38_05400) - 1067235..1068416 (-) 1182 WP_002984879.1 AI-2E family transporter -
  VKP38_RS05405 (VKP38_05405) mutX 1068474..1068950 (-) 477 WP_002984880.1 NUDIX hydrolase Machinery gene
  VKP38_RS05410 (VKP38_05410) rfbB 1069171..1070211 (-) 1041 WP_014635423.1 dTDP-glucose 4,6-dehydratase -
  VKP38_RS05415 (VKP38_05415) - 1070455..1071048 (-) 594 WP_002990099.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  VKP38_RS05420 (VKP38_05420) rfbA 1071048..1071917 (-) 870 WP_002992970.1 glucose-1-phosphate thymidylyltransferase RfbA -
  VKP38_RS05425 (VKP38_05425) - 1071975..1073081 (-) 1107 WP_326605497.1 FAD-dependent oxidoreductase -
  VKP38_RS05430 (VKP38_05430) - 1073121..1073909 (-) 789 WP_002984887.1 Nif3-like dinuclear metal center hexameric protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18462.68 Da        Isoelectric Point: 4.3268

>NTDB_id=840329 VKP38_RS05405 WP_002984880.1 1068474..1068950(-) (mutX) [Streptococcus pyogenes strain 2907-97]
MTQLATICYIDNGDSLLLLHRNKKENDVHKGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYDQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYDQNNQLMDKSVTFY

Nucleotide


Download         Length: 477 bp        

>NTDB_id=840329 VKP38_RS05405 WP_002984880.1 1068474..1068950(-) (mutX) [Streptococcus pyogenes strain 2907-97]
ATGACTCAATTAGCAACCATTTGTTACATTGATAATGGCGATTCTTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACAAAGGCAAGTGGATTTCAGTTGGGGGTAAGCTCGAGGCTGGTGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTTTAGAGGAAACCCATTTGACTGTTACAGAGATGGCCTTTAAAGGAATCATTACTTTTCCAGAATTTACCCCTGGTCAT
GACTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAAGAGTCACGAGAAGGAACCTT
GGAATGGGTACCTTACGATCAAGTGTTGGAAAAGCCAACTTGGGAAGGTGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGTCCTTTTTTCTCTGCCAAATTTACCTATGACCAAAACAACCAACTCATGGATAAATCTGTGACCTTTTATTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UU18

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

70.253

100

0.703