Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   QPR53_RS03290 Genome accession   NZ_CP126824
Coordinates   706949..707575 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain 21KM1500     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 701949..712575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPR53_RS03270 (QPR53_03275) - 702348..704108 (-) 1761 WP_022650741.1 Lon protease family protein -
  QPR53_RS03275 (QPR53_03280) matP 704295..704747 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  QPR53_RS03280 (QPR53_03285) ompA 704813..705865 (-) 1053 WP_003858156.1 porin OmpA -
  QPR53_RS03285 (QPR53_03290) sulA 706222..706731 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  QPR53_RS03290 (QPR53_03295) sxy/tfoX 706949..707575 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  QPR53_RS03295 (QPR53_03300) yccS 707532..709694 (-) 2163 WP_022650744.1 YccS family putative transporter -
  QPR53_RS03300 (QPR53_03305) - 709713..710159 (-) 447 WP_003858149.1 YccF domain-containing protein -
  QPR53_RS03305 (QPR53_03310) helD 710282..712336 (+) 2055 WP_022650745.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=840070 QPR53_RS03290 WP_023315767.1 706949..707575(+) (sxy/tfoX) [Enterobacter hormaechei strain 21KM1500]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=840070 QPR53_RS03290 WP_023315767.1 706949..707575(+) (sxy/tfoX) [Enterobacter hormaechei strain 21KM1500]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572