Detailed information NTG0083989

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QUD66_RS21355
• Genome accession: NZ_AP027156
• Coordinates: 4370081..4371106 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain JNE181771
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4365081..4376106

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUD66_RS21325 (JNE181771_40570)	zapB	4365165..4365410 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
QUD66_RS21330 (JNE181771_40580)	rraA	4365495..4365980 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QUD66_RS21335 (JNE181771_40590)	menA	4366073..4366999 (-)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QUD66_RS21340 (JNE181771_40600)	hslU	4367066..4368397 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
QUD66_RS21345 (JNE181771_40610)	hslV	4368407..4368937 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QUD66_RS21350 (JNE181771_40620)	ftsN	4369030..4369989 (-)	960	WP_000068834.1	cell division protein FtsN	-
QUD66_RS21355 (JNE181771_40630)	cytR	4370081..4371106 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QUD66_RS21360 (JNE181771_40640)	priA	4371262..4373460 (-)	2199	WP_001298972.1	primosomal protein N'	Machinery gene
QUD66_RS21365 (JNE181771_40650)	rpmE	4373663..4373875 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=83989 QUD66_RS21355 WP_000644904.1 4370081..4371106(-) (cytR) [Escherichia coli strain JNE181771]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=83989 QUD66_RS21355 WP_000644904.1 4370081..4371106(-) (cytR) [Escherichia coli strain JNE181771]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628