Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   VRA41_RS05265 Genome accession   NZ_CP142105
Coordinates   994324..994806 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain SCB0351     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 989324..999806
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VRA41_RS05245 (VRA41_05245) pepT 989804..991027 (-) 1224 WP_011226068.1 peptidase T -
  VRA41_RS05250 (VRA41_05250) lepB 991236..991793 (-) 558 WP_002953084.1 signal peptidase I -
  VRA41_RS05255 (VRA41_05255) - 991916..993145 (-) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  VRA41_RS05260 (VRA41_05260) - 993135..994313 (-) 1179 WP_011227264.1 AI-2E family transporter -
  VRA41_RS05265 (VRA41_05265) mutX 994324..994806 (-) 483 WP_011226072.1 NUDIX hydrolase Machinery gene
  VRA41_RS05270 (VRA41_05270) ftsX 994962..995891 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  VRA41_RS05275 (VRA41_05275) ftsE 995884..996576 (-) 693 WP_041827149.1 cell division ATP-binding protein FtsE -
  VRA41_RS05285 (VRA41_05285) queG 997815..998933 (-) 1119 WP_059257434.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=839862 VRA41_RS05265 WP_011226072.1 994324..994806(-) (mutX) [Streptococcus thermophilus strain SCB0351]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=839862 VRA41_RS05265 WP_011226072.1 994324..994806(-) (mutX) [Streptococcus thermophilus strain SCB0351]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706