Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   QPR62_RS07995 Genome accession   NZ_CP126778
Coordinates   1683554..1684180 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain Ehh_18     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1678554..1689180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPR62_RS07975 (QPR62_07975) - 1678953..1680713 (-) 1761 WP_032657964.1 Lon protease family protein -
  QPR62_RS07980 (QPR62_07980) matP 1680900..1681352 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  QPR62_RS07985 (QPR62_07985) ompA 1681418..1682470 (-) 1053 WP_017694761.1 porin OmpA -
  QPR62_RS07990 (QPR62_07990) sulA 1682827..1683336 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  QPR62_RS07995 (QPR62_07995) sxy/tfoX 1683554..1684180 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  QPR62_RS08000 (QPR62_08000) yccS 1684137..1686299 (-) 2163 WP_045894111.1 YccS family putative transporter -
  QPR62_RS08005 (QPR62_08005) - 1686318..1686764 (-) 447 WP_003858149.1 YccF domain-containing protein -
  QPR62_RS08010 (QPR62_08010) helD 1686887..1688941 (+) 2055 WP_032608969.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=839853 QPR62_RS07995 WP_023315767.1 1683554..1684180(+) (sxy/tfoX) [Enterobacter hormaechei strain Ehh_18]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=839853 QPR62_RS07995 WP_023315767.1 1683554..1684180(+) (sxy/tfoX) [Enterobacter hormaechei strain Ehh_18]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572