Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   VRA41_RS02445 Genome accession   NZ_CP142105
Coordinates   460336..461142 (+) Length   268 a.a.
NCBI ID   WP_011226941.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain SCB0351     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 455336..466142
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VRA41_RS02425 (VRA41_02425) tuf 456385..457581 (+) 1197 WP_002949971.1 elongation factor Tu -
  VRA41_RS02430 (VRA41_02430) tpiA 457830..458588 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  VRA41_RS02435 (VRA41_02435) tmk 458826..459455 (+) 630 WP_002946312.1 dTMP kinase -
  VRA41_RS02440 (VRA41_02440) - 459464..460339 (+) 876 WP_011226940.1 DNA polymerase III subunit delta' -
  VRA41_RS02445 (VRA41_02445) yaaT 460336..461142 (+) 807 WP_011226941.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  VRA41_RS02450 (VRA41_02450) yabA 461129..461449 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  VRA41_RS02455 (VRA41_02455) rsmI 461452..462318 (+) 867 WP_002949974.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  VRA41_RS02460 (VRA41_02460) - 462455..463690 (+) 1236 WP_041826977.1 ammonium transporter -
  VRA41_RS02465 (VRA41_02465) - 463701..464042 (+) 342 WP_041826978.1 P-II family nitrogen regulator -
  VRA41_RS02470 (VRA41_02470) - 464140..464796 (+) 657 WP_011225604.1 glycoside hydrolase family 73 protein -
  VRA41_RS02475 (VRA41_02475) - 464819..465640 (+) 822 WP_022096938.1 Cof-type HAD-IIB family hydrolase -
  VRA41_RS02480 (VRA41_02480) - 465659..466130 (-) 472 Protein_441 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29731.14 Da        Isoelectric Point: 4.5847

>NTDB_id=839847 VRA41_RS02445 WP_011226941.1 460336..461142(+) (yaaT) [Streptococcus thermophilus strain SCB0351]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMSGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=839847 VRA41_RS02445 WP_011226941.1 460336..461142(+) (yaaT) [Streptococcus thermophilus strain SCB0351]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTTTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAGCGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.586

98.134

0.418