Detailed information NTG0839591

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VQY98_RS00975
• Genome accession: NZ_CP142070
• Coordinates: 200375..201358 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain GN4143
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 195375..206358

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VQY98_RS00960 (VQY98_00955)	dppA	196518..198125 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
VQY98_RS00965 (VQY98_00960)	dppB	198433..199452 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VQY98_RS00970 (VQY98_00965)	dppC	199462..200364 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
VQY98_RS00975 (VQY98_00970)	amiE	200375..201358 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
VQY98_RS00980 (VQY98_00975)	dppF	201355..202359 (+)	1005	WP_000107018.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VQY98_RS00985 (VQY98_00980)	yhjV	202389..203660 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
VQY98_RS00990 (VQY98_00985)	ldrD	204136..204243 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
VQY98_RS00995 (VQY98_00990)	bcsG	204330..206009 (-)	1680	Protein_195	cellulose biosynthesis protein BcsG	-
VQY98_RS01000 (VQY98_00995)	bcsF	206006..206197 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=839591 VQY98_RS00975 WP_001196486.1 200375..201358(+) (amiE) [Escherichia coli strain GN4143]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=839591 VQY98_RS00975 WP_001196486.1 200375..201358(+) (amiE) [Escherichia coli strain GN4143]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404