Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | VOI49_RS09900 | Genome accession | NZ_CP142018 |
| Coordinates | 1966335..1968779 (-) | Length | 814 a.a. |
| NCBI ID | WP_226317243.1 | Uniprot ID | - |
| Organism | Streptococcus dysgalactiae strain lu24 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1961335..1973779
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VOI49_RS09880 | - | 1961691..1963187 (+) | 1497 | WP_003053008.1 | C69 family dipeptidase | - |
| VOI49_RS09885 | - | 1963521..1963988 (+) | 468 | WP_003053009.1 | 8-oxo-dGTP diphosphatase | - |
| VOI49_RS09890 | groL | 1964206..1965831 (-) | 1626 | WP_003053011.1 | chaperonin GroEL | - |
| VOI49_RS09895 | groES | 1965867..1966157 (-) | 291 | WP_226317242.1 | co-chaperone GroES | - |
| VOI49_RS09900 | clpC | 1966335..1968779 (-) | 2445 | WP_226317243.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| VOI49_RS09905 | - | 1968779..1969240 (-) | 462 | WP_115245552.1 | CtsR family transcriptional regulator | - |
| VOI49_RS09910 | - | 1969321..1970853 (-) | 1533 | Protein_1897 | IS1182 family transposase | - |
| VOI49_RS09915 | - | 1971001..1971204 (-) | 204 | WP_226314166.1 | cold-shock protein | - |
| VOI49_RS09920 | - | 1971612..1971788 (+) | 177 | WP_003053022.1 | hypothetical protein | - |
| VOI49_RS09925 | - | 1972178..1972489 (+) | 312 | WP_226314165.1 | amidohydrolase family protein | - |
| VOI49_RS09930 | - | 1972620..1973075 (+) | 456 | WP_003053027.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 814 a.a. Molecular weight: 90267.94 Da Isoelectric Point: 6.7390
>NTDB_id=839232 VOI49_RS09900 WP_226317243.1 1966335..1968779(-) (clpC) [Streptococcus dysgalactiae strain lu24]
MIMYSLKMQEIFRQAQFQAARFDSQYLETWHILLAMARVDHSLAGLVLSEFDAKVAVEEYEAAAILAMGKSPKGQVSHID
FRPQSKTLTNLLQFAQAISQVTKDQEVGSEHVLFAVLLNPDIMATRLLEMAGYAIKDKGNGEPRLADLRKAIEIHAGYSK
EMIKAIHELRKPKKTKNQGSFSDMMKPPSTAGDLADFTRDLTEMASQGLLEPVIGRDAEVSRMIQVLSRKTKNNPVLVGD
AGVGKTALAYGLAQRIANGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIIDDIESDGKIILFVDELHTIMGSGS
GIDSTLDAANILKPALSRGTLHMVGATTQEEYQKHIEKDAALSRRFAKILIEEPNVEDAYQILIGLKGSYETYHNVTIAD
QAVRTAVKMAHRYLTSKNLPDSAIDLLDEASATVQGMVKKTSPEIITPLDQALIDGDMKKASRLLAKDVKGQHRKPTAVT
EEDILTTLSKLSGIPLEKLSQADSKKYLNLEKELHKRVIGQKDAVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKT
ELAKALAEVLFDDASALIRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNILLQ
VLDDGMLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKGISHDHQAMEKRILEELKKTYRPEFINRIDEKVVFH
SLTQDNMREVVKIMVQPLMTTLAEKGITLKFQPMALKYLSEEGYDVEMGARPLRRTLQTQVEDKLSELILAGELASGHTL
KIGLSHGKLSFNIE
MIMYSLKMQEIFRQAQFQAARFDSQYLETWHILLAMARVDHSLAGLVLSEFDAKVAVEEYEAAAILAMGKSPKGQVSHID
FRPQSKTLTNLLQFAQAISQVTKDQEVGSEHVLFAVLLNPDIMATRLLEMAGYAIKDKGNGEPRLADLRKAIEIHAGYSK
EMIKAIHELRKPKKTKNQGSFSDMMKPPSTAGDLADFTRDLTEMASQGLLEPVIGRDAEVSRMIQVLSRKTKNNPVLVGD
AGVGKTALAYGLAQRIANGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIIDDIESDGKIILFVDELHTIMGSGS
GIDSTLDAANILKPALSRGTLHMVGATTQEEYQKHIEKDAALSRRFAKILIEEPNVEDAYQILIGLKGSYETYHNVTIAD
QAVRTAVKMAHRYLTSKNLPDSAIDLLDEASATVQGMVKKTSPEIITPLDQALIDGDMKKASRLLAKDVKGQHRKPTAVT
EEDILTTLSKLSGIPLEKLSQADSKKYLNLEKELHKRVIGQKDAVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKT
ELAKALAEVLFDDASALIRFDMSEYMEKFAASRLNGAPPGYVGYDEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNILLQ
VLDDGMLTDSRGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKGISHDHQAMEKRILEELKKTYRPEFINRIDEKVVFH
SLTQDNMREVVKIMVQPLMTTLAEKGITLKFQPMALKYLSEEGYDVEMGARPLRRTLQTQVEDKLSELILAGELASGHTL
KIGLSHGKLSFNIE
Nucleotide
Download Length: 2445 bp
>NTDB_id=839232 VOI49_RS09900 WP_226317243.1 1966335..1968779(-) (clpC) [Streptococcus dysgalactiae strain lu24]
ATGATCATGTATTCATTGAAGATGCAAGAAATTTTCAGGCAGGCGCAATTTCAAGCAGCCCGCTTTGATAGCCAATACCT
AGAAACTTGGCATATATTGCTAGCTATGGCGAGGGTTGATCACTCCCTAGCGGGTTTGGTGCTAAGCGAATTTGATGCTA
AGGTTGCAGTGGAAGAATATGAGGCTGCAGCTATTTTAGCTATGGGCAAAAGCCCTAAAGGCCAAGTGTCTCACATTGAC
TTTAGGCCTCAGTCAAAAACCTTAACGAACCTTTTGCAATTTGCCCAAGCTATCAGTCAAGTCACCAAAGACCAAGAGGT
AGGTTCAGAGCATGTTCTCTTTGCCGTTTTGCTTAATCCAGATATTATGGCGACTCGCTTATTAGAGATGGCTGGTTATG
CTATCAAGGATAAAGGAAACGGAGAACCTCGCTTAGCTGATTTACGAAAAGCTATCGAGATTCATGCAGGCTATAGTAAG
GAAATGATTAAGGCTATCCACGAGTTGCGTAAACCAAAGAAAACCAAGAATCAAGGTTCTTTTTCAGACATGATGAAGCC
ACCAAGCACGGCTGGGGATTTGGCAGACTTTACACGTGATTTGACCGAGATGGCAAGCCAAGGTCTCTTAGAGCCAGTTA
TTGGCCGTGATGCTGAAGTATCACGGATGATCCAAGTACTGAGTCGTAAAACCAAGAATAACCCTGTTCTTGTGGGTGAT
GCAGGTGTGGGTAAAACGGCCCTTGCCTATGGTCTTGCCCAACGTATTGCTAATGGTGCTATTCCTTATGAACTGCAAGA
CATGCGTGTTCTAGAATTAGATATGATGAGTGTTGTTGCGGGGACCCGTTTTCGTGGGGATTTTGAAGAGCGCATGAATC
AAATCATTGACGATATTGAGTCAGATGGCAAGATTATTCTCTTCGTAGATGAATTGCACACCATTATGGGATCAGGAAGT
GGTATTGATAGCACACTTGATGCTGCCAATATTTTAAAACCAGCCTTATCTCGCGGAACCCTCCATATGGTGGGTGCAAC
AACGCAGGAAGAATACCAAAAACACATTGAAAAAGATGCCGCTCTTTCGCGTCGCTTTGCTAAGATTTTAATTGAAGAGC
CTAATGTAGAAGATGCTTATCAGATTCTGATCGGGTTAAAAGGCTCTTACGAGACTTACCATAATGTGACCATTGCTGAT
CAGGCTGTTAGAACTGCTGTGAAAATGGCACATCGCTATCTGACCAGCAAAAACCTTCCAGATTCTGCCATTGATTTGCT
AGATGAAGCTAGTGCTACTGTCCAAGGTATGGTTAAAAAAACCAGTCCAGAAATCATCACGCCATTAGATCAAGCTTTGA
TTGATGGCGATATGAAGAAGGCCTCTCGTTTGTTGGCAAAAGACGTTAAAGGACAACATCGTAAGCCAACAGCTGTGACA
GAAGAGGATATCCTGACAACCTTGAGCAAGCTATCAGGTATTCCACTGGAAAAACTCAGCCAAGCTGATAGCAAAAAATA
CCTTAATTTGGAAAAAGAACTGCATAAGCGCGTGATTGGGCAAAAAGATGCTGTCTCAGCTATTTCTCGAGCGATTCGTC
GTAATCAGTCAGGCATCCGTACAGGTAAACGTCCGATTGGTTCCTTCATGTTCCTTGGTCCAACAGGGGTTGGTAAGACT
GAGTTGGCTAAAGCCTTGGCAGAAGTTCTCTTTGACGACGCGTCTGCCCTTATCCGCTTTGATATGTCAGAGTATATGGA
AAAATTTGCGGCTTCTCGTCTTAATGGCGCACCTCCAGGCTATGTCGGTTACGATGAAGGTGGTGAATTAACAGAGAAGG
TCAGAAACAAGCCTTACTCCGTGCTCCTCTTTGACGAGGTGGAAAAAGCTCACCCTGATATTTTCAACATACTCTTACAA
GTGCTTGATGACGGCATGTTGACAGATAGTCGTGGGCGTAAAGTGGACTTCTCAAACACCATTATTATCATGACAAGTAA
TCTAGGGGCAACAGCTCTGCGTGATGATAAAACAGTTGGCTTTGGGGCAAAAGGCATTAGCCATGACCACCAAGCCATGG
AAAAACGGATTTTGGAAGAGTTGAAGAAAACTTACCGACCAGAATTTATCAACCGAATTGATGAAAAGGTTGTCTTCCAC
AGCCTCACTCAGGATAATATGAGAGAAGTGGTCAAGATTATGGTGCAGCCGTTGATGACTACTTTGGCAGAAAAAGGCAT
TACCCTTAAATTCCAGCCAATGGCCCTCAAGTATTTATCAGAAGAAGGGTACGATGTGGAAATGGGTGCTCGTCCATTGC
GCCGTACTTTGCAAACTCAGGTGGAAGATAAATTGTCTGAATTGATTCTTGCTGGTGAATTGGCAAGTGGTCATACCCTG
AAAATTGGTCTTTCTCATGGAAAACTCAGCTTTAACATTGAGTGA
ATGATCATGTATTCATTGAAGATGCAAGAAATTTTCAGGCAGGCGCAATTTCAAGCAGCCCGCTTTGATAGCCAATACCT
AGAAACTTGGCATATATTGCTAGCTATGGCGAGGGTTGATCACTCCCTAGCGGGTTTGGTGCTAAGCGAATTTGATGCTA
AGGTTGCAGTGGAAGAATATGAGGCTGCAGCTATTTTAGCTATGGGCAAAAGCCCTAAAGGCCAAGTGTCTCACATTGAC
TTTAGGCCTCAGTCAAAAACCTTAACGAACCTTTTGCAATTTGCCCAAGCTATCAGTCAAGTCACCAAAGACCAAGAGGT
AGGTTCAGAGCATGTTCTCTTTGCCGTTTTGCTTAATCCAGATATTATGGCGACTCGCTTATTAGAGATGGCTGGTTATG
CTATCAAGGATAAAGGAAACGGAGAACCTCGCTTAGCTGATTTACGAAAAGCTATCGAGATTCATGCAGGCTATAGTAAG
GAAATGATTAAGGCTATCCACGAGTTGCGTAAACCAAAGAAAACCAAGAATCAAGGTTCTTTTTCAGACATGATGAAGCC
ACCAAGCACGGCTGGGGATTTGGCAGACTTTACACGTGATTTGACCGAGATGGCAAGCCAAGGTCTCTTAGAGCCAGTTA
TTGGCCGTGATGCTGAAGTATCACGGATGATCCAAGTACTGAGTCGTAAAACCAAGAATAACCCTGTTCTTGTGGGTGAT
GCAGGTGTGGGTAAAACGGCCCTTGCCTATGGTCTTGCCCAACGTATTGCTAATGGTGCTATTCCTTATGAACTGCAAGA
CATGCGTGTTCTAGAATTAGATATGATGAGTGTTGTTGCGGGGACCCGTTTTCGTGGGGATTTTGAAGAGCGCATGAATC
AAATCATTGACGATATTGAGTCAGATGGCAAGATTATTCTCTTCGTAGATGAATTGCACACCATTATGGGATCAGGAAGT
GGTATTGATAGCACACTTGATGCTGCCAATATTTTAAAACCAGCCTTATCTCGCGGAACCCTCCATATGGTGGGTGCAAC
AACGCAGGAAGAATACCAAAAACACATTGAAAAAGATGCCGCTCTTTCGCGTCGCTTTGCTAAGATTTTAATTGAAGAGC
CTAATGTAGAAGATGCTTATCAGATTCTGATCGGGTTAAAAGGCTCTTACGAGACTTACCATAATGTGACCATTGCTGAT
CAGGCTGTTAGAACTGCTGTGAAAATGGCACATCGCTATCTGACCAGCAAAAACCTTCCAGATTCTGCCATTGATTTGCT
AGATGAAGCTAGTGCTACTGTCCAAGGTATGGTTAAAAAAACCAGTCCAGAAATCATCACGCCATTAGATCAAGCTTTGA
TTGATGGCGATATGAAGAAGGCCTCTCGTTTGTTGGCAAAAGACGTTAAAGGACAACATCGTAAGCCAACAGCTGTGACA
GAAGAGGATATCCTGACAACCTTGAGCAAGCTATCAGGTATTCCACTGGAAAAACTCAGCCAAGCTGATAGCAAAAAATA
CCTTAATTTGGAAAAAGAACTGCATAAGCGCGTGATTGGGCAAAAAGATGCTGTCTCAGCTATTTCTCGAGCGATTCGTC
GTAATCAGTCAGGCATCCGTACAGGTAAACGTCCGATTGGTTCCTTCATGTTCCTTGGTCCAACAGGGGTTGGTAAGACT
GAGTTGGCTAAAGCCTTGGCAGAAGTTCTCTTTGACGACGCGTCTGCCCTTATCCGCTTTGATATGTCAGAGTATATGGA
AAAATTTGCGGCTTCTCGTCTTAATGGCGCACCTCCAGGCTATGTCGGTTACGATGAAGGTGGTGAATTAACAGAGAAGG
TCAGAAACAAGCCTTACTCCGTGCTCCTCTTTGACGAGGTGGAAAAAGCTCACCCTGATATTTTCAACATACTCTTACAA
GTGCTTGATGACGGCATGTTGACAGATAGTCGTGGGCGTAAAGTGGACTTCTCAAACACCATTATTATCATGACAAGTAA
TCTAGGGGCAACAGCTCTGCGTGATGATAAAACAGTTGGCTTTGGGGCAAAAGGCATTAGCCATGACCACCAAGCCATGG
AAAAACGGATTTTGGAAGAGTTGAAGAAAACTTACCGACCAGAATTTATCAACCGAATTGATGAAAAGGTTGTCTTCCAC
AGCCTCACTCAGGATAATATGAGAGAAGTGGTCAAGATTATGGTGCAGCCGTTGATGACTACTTTGGCAGAAAAAGGCAT
TACCCTTAAATTCCAGCCAATGGCCCTCAAGTATTTATCAGAAGAAGGGTACGATGTGGAAATGGGTGCTCGTCCATTGC
GCCGTACTTTGCAAACTCAGGTGGAAGATAAATTGTCTGAATTGATTCTTGCTGGTGAATTGGCAAGTGGTCATACCCTG
AAAATTGGTCTTTCTCATGGAAAACTCAGCTTTAACATTGAGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus mutans UA159 |
76.63 |
99.877 |
0.765 |
| clpC | Streptococcus thermophilus LMD-9 |
73.039 |
100 |
0.732 |
| clpC | Streptococcus thermophilus LMG 18311 |
72.794 |
100 |
0.73 |
| clpC | Streptococcus pneumoniae TIGR4 |
66.913 |
99.877 |
0.668 |
| clpC | Streptococcus pneumoniae Rx1 |
66.913 |
99.877 |
0.668 |
| clpC | Streptococcus pneumoniae D39 |
66.913 |
99.877 |
0.668 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.801 |
100 |
0.5 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.081 |
100 |
0.44 |