Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   F0321_RS07195 Genome accession   NZ_CP126610
Coordinates   1540289..1540915 (+) Length   208 a.a.
NCBI ID   WP_023311030.1    Uniprot ID   A0A1Z3N2L7
Organism   Enterobacter asburiae strain E2     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1535289..1545915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F0321_RS07175 (F0321_07180) - 1535686..1537446 (-) 1761 WP_126328164.1 Lon protease family protein -
  F0321_RS07180 (F0321_07185) matP 1537633..1538085 (+) 453 WP_032658161.1 macrodomain Ter protein MatP -
  F0321_RS07185 (F0321_07190) ompA 1538152..1539207 (-) 1056 WP_023311028.1 porin OmpA -
  F0321_RS07190 (F0321_07195) sulA 1539562..1540071 (-) 510 WP_126328783.1 SOS-induced cell division inhibitor SulA -
  F0321_RS07195 (F0321_07200) sxy/tfoX 1540289..1540915 (+) 627 WP_023311030.1 TfoX/Sxy family DNA transformation protein Regulator
  F0321_RS07200 (F0321_07205) yccS 1540872..1543034 (-) 2163 WP_126328165.1 YccS family putative transporter -
  F0321_RS07205 (F0321_07210) - 1543054..1543500 (-) 447 WP_023311032.1 YccF domain-containing protein -
  F0321_RS07210 (F0321_07215) helD 1543624..1545678 (+) 2055 WP_149323882.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23906.46 Da        Isoelectric Point: 9.4588

>NTDB_id=839129 F0321_RS07195 WP_023311030.1 1540289..1540915(+) (sxy/tfoX) [Enterobacter asburiae strain E2]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=839129 F0321_RS07195 WP_023311030.1 1540289..1540915(+) (sxy/tfoX) [Enterobacter asburiae strain E2]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAAATTCATCACCGGGCTCT
GTTTGGAGGCTATACCCTGGCGGTAGATGATGCGGTGTTTGCCATGGTGTCAGACGGCGAACTTTATCTTCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TACTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTTAGTGCGGCAAG
AAAAGAGCGCTATCAGCGCCATCAACGAAACCGCTTAAAGGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCAGGCATCACTAATGAGGAAACGCTGCGTGCGCTGGGTGCCAGAGCGAGCTGGCTAAAGATGCGGGCAAAAAAC
AAAGCGCTCAGTATTAAGGTTCTCTTTGCGCTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTACCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Z3N2L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567