Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   F0323_RS08015 Genome accession   NZ_CP126608
Coordinates   1709983..1710609 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain E11     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1704983..1715609
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F0323_RS07995 (F0323_007990) - 1705382..1707142 (-) 1761 WP_149604343.1 Lon protease family protein -
  F0323_RS08000 (F0323_007995) matP 1707329..1707781 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  F0323_RS08005 (F0323_008000) ompA 1707847..1708899 (-) 1053 WP_017694761.1 porin OmpA -
  F0323_RS08010 (F0323_008005) sulA 1709256..1709765 (-) 510 WP_032104231.1 SOS-induced cell division inhibitor SulA -
  F0323_RS08015 (F0323_008010) sxy/tfoX 1709983..1710609 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  F0323_RS08020 (F0323_008015) yccS 1710566..1712728 (-) 2163 WP_015570895.1 YccS family putative transporter -
  F0323_RS08025 (F0323_008020) - 1712747..1713193 (-) 447 WP_003858149.1 YccF domain-containing protein -
  F0323_RS08030 (F0323_008025) helD 1713316..1715370 (+) 2055 WP_032653161.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=839108 F0323_RS08015 WP_017384804.1 1709983..1710609(+) (sxy/tfoX) [Enterobacter hormaechei strain E11]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=839108 F0323_RS08015 WP_017384804.1 1709983..1710609(+) (sxy/tfoX) [Enterobacter hormaechei strain E11]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAGGATCTGCCGAATCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTACCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572