Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QPR36_RS07025 Genome accession   NZ_CP126577
Coordinates   1369249..1369845 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain 411     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1364249..1374845
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPR36_RS06995 (QPR36_06995) - 1364464..1364919 (+) 456 WP_003154599.1 flavodoxin -
  QPR36_RS07000 (QPR36_07000) dapD 1365001..1365711 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QPR36_RS07005 (QPR36_07005) - 1365781..1366905 (+) 1125 WP_046559551.1 N-acetyldiaminopimelate deacetylase -
  QPR36_RS07010 (QPR36_07010) - 1366966..1367211 (+) 246 WP_003154596.1 YkuS family protein -
  QPR36_RS07015 (QPR36_07015) - 1367245..1368051 (-) 807 WP_003154595.1 mechanosensitive ion channel family protein -
  QPR36_RS07020 (QPR36_07020) - 1368339..1368797 (+) 459 WP_024085241.1 TlpA disulfide reductase family protein -
  QPR36_RS07025 (QPR36_07025) rok 1369249..1369845 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  QPR36_RS07030 (QPR36_07030) - 1369866..1370858 (-) 993 WP_003154589.1 hypothetical protein -
  QPR36_RS07035 (QPR36_07035) - 1371004..1371606 (+) 603 WP_015388303.1 molybdenum cofactor guanylyltransferase -
  QPR36_RS07040 (QPR36_07040) - 1371658..1372677 (+) 1020 WP_069013468.1 molybdopterin-synthase adenylyltransferase MoeB -
  QPR36_RS07045 (QPR36_07045) glp 1372695..1373987 (+) 1293 WP_015388302.1 gephyrin-like molybdotransferase Glp -
  QPR36_RS07050 (QPR36_07050) mobB 1373948..1374469 (+) 522 WP_139886632.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=838865 QPR36_RS07025 WP_003154591.1 1369249..1369845(+) (rok) [Bacillus velezensis strain 411]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=838865 QPR36_RS07025 WP_003154591.1 1369249..1369845(+) (rok) [Bacillus velezensis strain 411]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCGCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCAGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATCTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843