NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	VOA82_RS06005	Genome accession	NZ_CP141951
Coordinates	1320552..1323125 (+)	Length	857 a.a.
NCBI ID	WP_005615435.1	Uniprot ID	-
Organism	Actinobacillus pleuropneumoniae strain ZJXS2022
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1315552..1328125

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VOA82_RS05985 (VOA82_05965)	-	1316212..1317618 (+)	1407	WP_005604829.1	basic amino acid/polyamine antiporter	-
VOA82_RS05990 (VOA82_05970)	-	1317627..1318406 (+)	780	WP_005619487.1	hypothetical protein	-
VOA82_RS05995 (VOA82_05975)	argE	1318421..1319563 (+)	1143	WP_005597944.1	acetylornithine deacetylase	-
VOA82_RS06000 (VOA82_05980)	-	1319644..1320291 (-)	648	WP_005597946.1	OmpW family protein	-
VOA82_RS06005 (VOA82_05985)	clpC	1320552..1323125 (+)	2574	WP_005615435.1	ATP-dependent chaperone ClpB	Regulator
VOA82_RS06010 (VOA82_05990)	arsB	1323182..1324183 (-)	1002	WP_237593256.1	ACR3 family arsenite efflux transporter	-
VOA82_RS06015 (VOA82_05995)	arsC	1324195..1324599 (-)	405	WP_005619479.1	arsenate reductase (glutaredoxin)	-
VOA82_RS06020 (VOA82_06000)	-	1324659..1324973 (-)	315	WP_370429577.1	ArsR/SmtB family transcription factor	-
VOA82_RS06025 (VOA82_06005)	aspA	1325101..1326528 (-)	1428	WP_005597956.1	aspartate ammonia-lyase	-
VOA82_RS06030 (VOA82_06010)	-	1326669..1326950 (-)	282	WP_011848529.1	DUF1294 domain-containing protein	-
VOA82_RS06035 (VOA82_06015)	purM	1327024..1328061 (-)	1038	WP_005597960.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

Download Length: 857 a.a. Molecular weight: 95784.17 Da Isoelectric Point: 5.1976

                                >NTDB_id=838830 VOA82_RS06005 WP_005615435.1 1320552..1323125(+) (clpC) [Actinobacillus pleuropneumoniae strain ZJXS2022]

MNFEKFTTKLQEALAEAQSLAIGKDNNYIEPAHLLYALVKQPDGSIAPLFTALNVQPQRILSELETILNRLPTVSGGTTQ

PSQQLIRLLNQCDKLAQQFGDSFISSELFVLAALDDNGDLGKLLKQFGLTKEKVNAAISQIRGGENVNNQNAEETRQALQ

KYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDM

GALIAGAKYRGEFEERLKAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQY

IEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSLR

MEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENA

RIEMDQARRENNFEKMSELQYGKIPALEKQLHEAVKREEEGSENQLLRTKVTEEEIAEVLSKATGIPVSKMMEGEKEKLL

RMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDDPDAMVRIDMSEFMEK

HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL

GSHLIQENPELDYAGMKEVVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVTVTDAALD

HIGKAGFDPLFGARPLKRAIQQELENPLAQQILSGKLLPNSPVVVDYQNDRLSISNS

Nucleotide

Download Length: 2574 bp

                                >NTDB_id=838830 VOA82_RS06005 WP_005615435.1 1320552..1323125(+) (clpC) [Actinobacillus pleuropneumoniae strain ZJXS2022]

ATGAATTTCGAAAAATTTACTACCAAATTGCAAGAAGCCCTTGCAGAAGCACAATCGTTAGCTATCGGAAAAGATAATAA

CTATATTGAACCGGCACATTTACTTTATGCGTTAGTCAAACAACCGGACGGCTCTATCGCCCCGCTATTTACTGCACTTA

ATGTACAACCGCAACGTATTTTGAGTGAATTAGAGACGATTTTAAACCGCTTACCGACCGTATCCGGCGGTACAACCCAA

CCGTCACAACAATTAATTCGCCTGTTAAATCAATGCGATAAACTAGCGCAGCAATTCGGTGACAGCTTTATTTCATCGGA

ATTATTCGTGCTTGCCGCACTGGACGATAACGGCGATTTAGGCAAATTATTAAAACAATTTGGCTTGACTAAAGAAAAAG

TAAACGCAGCCATCAGCCAAATTCGAGGAGGAGAAAACGTGAATAATCAAAACGCAGAAGAAACCAGACAGGCCCTTCAA

AAATATACTATCGATCTCACAGAAAGAGCCAAAGCCGGTAAATTAGATCCGGTCATCGGGCGTGATGAAGAAATCCGCCG

TGCAGTACAAGTTTTACAACGCCGTACTAAAAATAACCCGGTATTAATCGGTGAACCTGGGGTCGGTAAAACTGCGATCG

TAGAAGGCTTGGCACAACGTATCGTCAACGGCGAAGTGCCGGAAGGTTTAAAAAATAAACGTGTACTTTCTCTCGATATG

GGCGCATTAATTGCTGGTGCAAAATATCGCGGCGAATTTGAAGAACGTCTAAAAGCGGTACTTAACGAATTAGCCAAAGA

AGAAGGTCAGGTTATCTTATTTATTGATGAAATTCACACCATGGTCGGTGCGGGTAAAACAGACGGCGCAATGGATGCCG

GTAACTTACTCAAGCCGTCACTTGCTCGCGGCGAATTACATTGCGTTGGGGCAACTACGTTAGACGAATACCGCCAATAT

ATCGAAAAAGATGCGGCACTTGAACGTCGTTTCCAAAAAGTATTAGTGGACGAACCGACCGTTGAGGATACGATTGCAAT

TTTACGCGGCTTGAAAGAACGTTATGAAATTCATCACCACGTACAAATTACCGACCCGGCAATTGTCGCGGCGGCAACGC

TTTCGCACCGTTATATTTCCGACCGCCAATTACCGGATAAAGCGATCGATTTAATTGATGAAGCCGCATCCAGTTTACGT

ATGGAAATCGATTCTAAACCTGAGCCGTTGGATAAACTTGAACGCCGTATTATTCAACTTAAATTGGAACGCCAAGCGTT

ACAAAAAGAGGAAGATGAAGCAAGCCGCCAACGTCTTGCAAAATTAGATGAAGAATTGACCGCTCGCGAGCGTGAATATT

CCGAATTGGAAGAAGTTTGGAAAGCGGAGAAATCAGCATTACTCGGTACGCAACATATCAAAACTGAGTTAGAAAATGCC

CGTATCGAAATGGATCAGGCTCGCCGTGAAAATAATTTCGAGAAAATGTCCGAATTGCAATACGGTAAAATTCCGGCATT

GGAAAAACAATTACACGAAGCGGTAAAACGCGAGGAAGAAGGCAGTGAAAATCAACTGCTTCGTACCAAAGTCACCGAGG

AGGAAATCGCAGAAGTGCTTTCAAAAGCGACCGGTATTCCGGTTTCCAAAATGATGGAAGGCGAAAAAGAAAAACTATTG

CGTATGGAAGAAGTGTTACACAGCCGTGTCATCGGACAAAATGAAGCGGTAGAAGCGGTGGCAAATGCAATTCGCCGTAG

CCGTGCCGGATTGTCGGATCCGAATCGTCCGATCGGTTCGTTCTTATTCCTTGGCCCGACCGGGGTCGGTAAGACCGAAC

TTTGCAAAACCTTGGCGAATTTCCTATTCGATGATCCTGATGCGATGGTACGTATCGATATGTCGGAATTTATGGAAAAA

CACAGCGTTTCTCGTTTAGTCGGCGCACCTCCGGGCTATGTCGGTTATGAAGAAGGCGGTTATTTAACCGAAGCGGTTCG

CCGCCGTCCATATTCGGTAGTATTACTCGATGAAGTGGAAAAAGCGCACCCTGACGTGTTTAATATCTTGCTTCAAGTGT

TGGATGACGGTCGTTTAACCGATGGTCAAGGTCGTACGGTGGATTTTCGTAATACGGTAGTAATTATGACCTCAAACTTA

GGTTCACATTTAATCCAAGAAAATCCGGAATTAGATTATGCTGGAATGAAAGAAGTAGTGATGTCAGTGGTAGGACAACA

TTTCCGTCCTGAATTTATCAACCGTATTGATGAAACTGTGGTGTTCCACCCACTTGGTCAAGCACATATCCGTGCGATTG

CTCGCATTCAGTTACAACGTTTAATCGCTCGCCTTGCGGAACGCGGTTACGAAGTAACAGTTACCGATGCGGCATTAGAC

CATATCGGCAAAGCCGGCTTTGACCCGTTATTCGGTGCAAGACCGCTCAAACGTGCGATTCAGCAAGAGCTTGAAAATCC

GCTTGCACAACAGATCTTAAGCGGCAAATTATTACCGAACAGCCCAGTTGTGGTGGACTATCAAAATGACCGATTAAGCA

TTAGCAACAGCTAA