Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QPK28_RS06115 Genome accession   NZ_CP126576
Coordinates   1224937..1225890 (+) Length   317 a.a.
NCBI ID   WP_020450927.1    Uniprot ID   A0A6N2FML9
Organism   Bacillus licheniformis strain CQMB003     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1219937..1230890
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPK28_RS06085 argF 1220805..1221755 (+) 951 WP_020450924.1 ornithine carbamoyltransferase -
  QPK28_RS06090 - 1221793..1222605 (-) 813 WP_020450925.1 undecaprenyl-diphosphate phosphatase -
  QPK28_RS06095 - 1222787..1222966 (+) 180 WP_003180573.1 YjzC family protein -
  QPK28_RS06100 - 1223030..1223224 (-) 195 WP_009328851.1 YjzD family protein -
  QPK28_RS06105 - 1223456..1224190 (+) 735 WP_020450926.1 hypothetical protein -
  QPK28_RS06110 - 1224277..1224852 (+) 576 WP_003180580.1 hypothetical protein -
  QPK28_RS06115 med 1224937..1225890 (+) 954 WP_020450927.1 BMP family ABC transporter substrate-binding protein Regulator
  QPK28_RS06120 comZ 1225901..1226086 (+) 186 WP_011197761.1 ComZ family protein Regulator
  QPK28_RS06125 - 1226139..1226381 (-) 243 WP_020450928.1 hypothetical protein -
  QPK28_RS06130 - 1226550..1227488 (+) 939 WP_003180588.1 beta-ketoacyl-ACP synthase III -
  QPK28_RS06135 fabF 1227510..1228748 (+) 1239 WP_003180590.1 beta-ketoacyl-ACP synthase II -
  QPK28_RS06140 - 1229023..1229616 (+) 594 WP_229118231.1 hypothetical protein -
  QPK28_RS06145 - 1229825..1230613 (+) 789 WP_025808298.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35390.09 Da        Isoelectric Point: 4.7166

>NTDB_id=838777 QPK28_RS06115 WP_020450927.1 1224937..1225890(+) (med) [Bacillus licheniformis strain CQMB003]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKADHPNVTSISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFSEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQDGVIEMGEFSPVVDQSFQEKMNRLIDEYKKTNKLPNEH

Nucleotide


Download         Length: 954 bp        

>NTDB_id=838777 QPK28_RS06115 WP_020450927.1 1224937..1225890(+) (med) [Bacillus licheniformis strain CQMB003]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAATGACCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGACGTCTATTATAAAGAGGGAATCGATAATGACGCTGCCATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAACCTCATCTACGGGCACGGAAGCGAATATGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCTGATATTCATTTTGTTTTAATGAACTCGAAAGCCGATCACCCAAATGTGACAAGCATATCGCTTGAAGGAGAAGCGA
TGGGGTTCTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTAGAAGGATTTTCCGAAGGGGCTAAATACCTCGATCCGGACATTGAGGTGATGACAGAATATGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCTATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACCATACAGCATGTAGACGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGCTCATTTGACATTCAAGACGGCGTCATCGAAATGGGAGAATTCAGCCCTGTTGTCGATC
AGTCATTTCAAGAAAAGATGAATCGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N2FML9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

68.153

99.054

0.675