Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | VJ737_RS19370 | Genome accession | NZ_CP141909 |
| Coordinates | 4285165..4287771 (-) | Length | 868 a.a. |
| NCBI ID | WP_184594376.1 | Uniprot ID | A0A7W5F2Z0 |
| Organism | Streptomyces sp. CGMCC 4.1772 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4280165..4292771
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VJ737_RS19345 (VJ737_19345) | - | 4280967..4281251 (-) | 285 | WP_184594385.1 | hypothetical protein | - |
| VJ737_RS19350 (VJ737_19350) | - | 4281380..4282579 (+) | 1200 | WP_184594383.1 | pyridoxal phosphate-dependent aminotransferase | - |
| VJ737_RS19355 (VJ737_19355) | - | 4282673..4283203 (-) | 531 | WP_184594381.1 | YbjN domain-containing protein | - |
| VJ737_RS19360 (VJ737_19360) | - | 4283352..4284035 (-) | 684 | WP_184594379.1 | peptidase inhibitor family I36 protein | - |
| VJ737_RS19365 (VJ737_19365) | - | 4284086..4284613 (-) | 528 | WP_184594377.1 | hypothetical protein | - |
| VJ737_RS19370 (VJ737_19370) | clpC | 4285165..4287771 (-) | 2607 | WP_184594376.1 | ATP-dependent chaperone ClpB | Regulator |
| VJ737_RS19375 (VJ737_19375) | - | 4287915..4288331 (+) | 417 | WP_184594374.1 | TIGR03618 family F420-dependent PPOX class oxidoreductase | - |
| VJ737_RS19380 (VJ737_19380) | - | 4288509..4288844 (-) | 336 | WP_184594372.1 | hypothetical protein | - |
| VJ737_RS19385 (VJ737_19385) | - | 4289148..4290170 (+) | 1023 | WP_184594370.1 | helix-turn-helix transcriptional regulator | - |
| VJ737_RS19390 (VJ737_19390) | - | 4290167..4291153 (+) | 987 | WP_184594369.1 | helix-turn-helix transcriptional regulator | - |
| VJ737_RS19395 (VJ737_19395) | - | 4291116..4292159 (-) | 1044 | WP_184594367.1 | helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 868 a.a. Molecular weight: 94884.55 Da Isoelectric Point: 4.7357
>NTDB_id=838703 VJ737_RS19370 WP_184594376.1 4285165..4287771(-) (clpC) [Streptomyces sp. CGMCC 4.1772]
MDAELTNRSRDAINAASNRAVTEGHPDLTPAHLLLSLLQGQDNENITDLLAAVDADQAAVRAGAERVLAGLPSVTGSTVA
PPQPNREMLAVVADAQARAKELGDEYLSTEHLLLGIAAKGGAAGEVLSGQGADAKKLQAAFQKARGQRRVTTADPEGQYK
ALEKFGTDFTAAAREGKLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIIKGDVPESLKDKRLVA
LDLGAMVAGAKYRGEFEERLKTVLAEIKDSDGQIITFIDELHTVVGAGAGGDSAMDAGNMLKPMLARGELRMVGATTLDE
YRERIEKDPALERRFQQVLVAEPTVEDSIAILRGLKGRYEAHHKVQIADSALVAAASLSDRYITSRFLPDKAIDLVDEAA
SRLRMEIDSSPVEIDELQRAVDRLKMEELAIGKETDAASRERLEKLRRDLADKEEELRGLTARWEKEKQSLNRVGELKER
LDEVRGQAERAQRDGDFDTASKLLYGEIPALEKELEAASEAEEEVAKDTMVKEEVGSDDIADVVASWTGIPAGRLLEGET
QKLLRMEDELGKRLIGQTEAVRAVSDAVRRSRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSE
YSEKHSVARLVGAPPGYIGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTILVL
TSNLGSQFLVDPITSEEEKKEQVLEVVRTSFKPEFLNRLDDLVVFAALTKPELERIAKLQLERLAKRLAERRLTLDITPE
ALAWLAEEGMDPAYGARPLRRLVQSAIGDRLAKEILSGEIKDGDTVRVDRFEQGLIVGPATGTAGKTL
MDAELTNRSRDAINAASNRAVTEGHPDLTPAHLLLSLLQGQDNENITDLLAAVDADQAAVRAGAERVLAGLPSVTGSTVA
PPQPNREMLAVVADAQARAKELGDEYLSTEHLLLGIAAKGGAAGEVLSGQGADAKKLQAAFQKARGQRRVTTADPEGQYK
ALEKFGTDFTAAAREGKLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIIKGDVPESLKDKRLVA
LDLGAMVAGAKYRGEFEERLKTVLAEIKDSDGQIITFIDELHTVVGAGAGGDSAMDAGNMLKPMLARGELRMVGATTLDE
YRERIEKDPALERRFQQVLVAEPTVEDSIAILRGLKGRYEAHHKVQIADSALVAAASLSDRYITSRFLPDKAIDLVDEAA
SRLRMEIDSSPVEIDELQRAVDRLKMEELAIGKETDAASRERLEKLRRDLADKEEELRGLTARWEKEKQSLNRVGELKER
LDEVRGQAERAQRDGDFDTASKLLYGEIPALEKELEAASEAEEEVAKDTMVKEEVGSDDIADVVASWTGIPAGRLLEGET
QKLLRMEDELGKRLIGQTEAVRAVSDAVRRSRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSE
YSEKHSVARLVGAPPGYIGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTILVL
TSNLGSQFLVDPITSEEEKKEQVLEVVRTSFKPEFLNRLDDLVVFAALTKPELERIAKLQLERLAKRLAERRLTLDITPE
ALAWLAEEGMDPAYGARPLRRLVQSAIGDRLAKEILSGEIKDGDTVRVDRFEQGLIVGPATGTAGKTL
Nucleotide
Download Length: 2607 bp
>NTDB_id=838703 VJ737_RS19370 WP_184594376.1 4285165..4287771(-) (clpC) [Streptomyces sp. CGMCC 4.1772]
GTGGACGCCGAGCTGACCAACAGGAGCCGGGACGCGATCAACGCGGCCAGCAACCGGGCCGTGACCGAGGGGCACCCCGA
CCTCACCCCTGCCCATCTGCTGCTGTCGCTGCTTCAAGGGCAGGACAACGAGAACATCACCGACCTGCTCGCGGCGGTCG
ACGCCGACCAGGCGGCCGTCCGCGCCGGAGCCGAGCGCGTGCTCGCCGGACTGCCCAGCGTGACCGGCTCCACCGTGGCG
CCGCCCCAGCCCAACCGCGAGATGCTCGCCGTCGTCGCCGACGCGCAGGCCCGCGCCAAGGAGCTCGGGGACGAGTACCT
CTCCACGGAGCACCTCCTCCTCGGCATCGCCGCGAAGGGCGGCGCGGCCGGCGAGGTGCTGTCCGGGCAGGGGGCCGACG
CCAAGAAGCTCCAGGCGGCCTTCCAGAAGGCACGAGGGCAGCGACGCGTGACCACGGCGGACCCCGAGGGCCAGTACAAG
GCCCTGGAGAAGTTCGGCACCGACTTCACCGCCGCCGCCCGCGAGGGCAAGCTCGACCCGGTCATCGGCCGGGACCAGGA
GATCCGGCGGGTCGTGCAGGTGCTGTCCCGGCGGACCAAGAACAACCCCGTGCTGATCGGTGAGCCCGGTGTCGGCAAGA
CCGCCGTCGTCGAGGGGCTCGCCCAGCGGATCATCAAGGGGGACGTACCGGAGTCCCTCAAGGACAAGCGGCTCGTCGCG
CTCGACCTGGGCGCGATGGTCGCCGGGGCGAAGTACCGAGGTGAGTTCGAGGAGCGGCTGAAGACCGTCCTGGCCGAGAT
CAAGGACTCCGACGGGCAGATCATCACCTTCATCGACGAGCTGCACACCGTCGTCGGGGCCGGGGCCGGCGGCGACTCCG
CCATGGACGCCGGGAACATGCTCAAGCCGATGCTCGCGCGCGGTGAGCTGCGCATGGTGGGCGCCACGACCCTCGACGAG
TACCGGGAGCGGATCGAGAAGGACCCCGCCCTGGAGCGGCGCTTCCAGCAGGTGCTGGTCGCCGAGCCGACCGTCGAGGA
CTCCATCGCGATCCTGCGCGGGCTCAAGGGGCGGTACGAGGCCCACCACAAGGTGCAGATCGCGGACAGCGCCCTGGTCG
CCGCCGCATCGCTCTCCGACCGGTACATCACCTCCCGCTTCCTGCCCGACAAGGCCATCGACCTGGTCGACGAGGCCGCC
TCGCGGCTGCGCATGGAGATCGACTCGTCCCCCGTCGAGATCGACGAACTCCAGCGCGCCGTCGACCGGCTGAAGATGGA
GGAGCTGGCGATCGGCAAGGAGACCGACGCGGCCTCACGCGAGCGCCTGGAGAAGCTGCGCCGCGACCTCGCCGACAAGG
AGGAGGAGCTGCGCGGCCTCACCGCCCGCTGGGAGAAGGAGAAGCAGTCCCTCAACCGGGTCGGCGAGCTGAAGGAACGC
CTCGACGAGGTGCGCGGCCAGGCCGAACGAGCCCAGCGCGACGGCGACTTCGACACCGCCTCCAAGCTGCTCTACGGCGA
GATCCCCGCCCTGGAGAAGGAACTGGAGGCCGCCTCCGAGGCCGAGGAAGAGGTCGCGAAGGACACCATGGTCAAGGAGG
AGGTCGGCTCCGACGACATCGCCGACGTCGTCGCCTCCTGGACCGGCATCCCGGCCGGGCGCCTGCTGGAGGGCGAGACG
CAGAAGCTGCTGCGCATGGAGGATGAGCTCGGCAAGCGCCTCATCGGCCAGACGGAGGCGGTGCGCGCGGTGAGCGATGC
CGTACGCCGCAGCCGCGCCGGGATCGCCGACCCCGACCGCCCCACCGGCTCCTTCCTCTTCCTGGGCCCGACGGGCGTGG
GCAAGACCGAACTGGCCAAGGCCCTCGCCGACTTCCTCTTCGACGACGAGCGGGCGATGGTCCGCATCGACATGTCGGAG
TACAGCGAGAAGCACAGCGTGGCCCGGCTGGTCGGCGCCCCGCCCGGATACATCGGCTACGAGGAGGGCGGCCAGCTCAC
CGAGGCGGTGCGCCGCCGCCCGTACTCCGTCGTCCTGCTGGACGAGGTGGAGAAGGCCCACCCCGAGGTCTTCGACATCC
TGCTCCAGGTCCTGGACGACGGCCGGCTCACGGACGGCCAGGGCCGCACGGTCGACTTCCGCAACACGATCCTGGTGCTG
ACGTCGAACCTGGGCAGTCAGTTCCTGGTCGACCCGATCACCAGCGAGGAGGAGAAGAAGGAGCAGGTCCTGGAGGTGGT
GCGGACCTCGTTCAAGCCGGAGTTCCTCAACCGCCTGGACGACCTGGTCGTCTTCGCCGCGCTGACCAAGCCGGAGCTGG
AGCGCATCGCGAAGCTCCAGCTCGAGCGCCTGGCCAAGCGCCTCGCCGAGCGGCGCCTCACCCTGGACATCACGCCCGAG
GCCCTGGCCTGGCTCGCCGAGGAGGGCATGGACCCGGCGTACGGCGCCCGCCCGCTGCGCCGCCTCGTCCAGTCCGCCAT
CGGCGACCGCCTCGCCAAGGAGATCCTCTCCGGCGAGATCAAGGACGGCGACACGGTCCGGGTGGACCGCTTCGAGCAGG
GCCTGATCGTGGGCCCGGCCACGGGCACCGCGGGCAAGACGCTCTGA
GTGGACGCCGAGCTGACCAACAGGAGCCGGGACGCGATCAACGCGGCCAGCAACCGGGCCGTGACCGAGGGGCACCCCGA
CCTCACCCCTGCCCATCTGCTGCTGTCGCTGCTTCAAGGGCAGGACAACGAGAACATCACCGACCTGCTCGCGGCGGTCG
ACGCCGACCAGGCGGCCGTCCGCGCCGGAGCCGAGCGCGTGCTCGCCGGACTGCCCAGCGTGACCGGCTCCACCGTGGCG
CCGCCCCAGCCCAACCGCGAGATGCTCGCCGTCGTCGCCGACGCGCAGGCCCGCGCCAAGGAGCTCGGGGACGAGTACCT
CTCCACGGAGCACCTCCTCCTCGGCATCGCCGCGAAGGGCGGCGCGGCCGGCGAGGTGCTGTCCGGGCAGGGGGCCGACG
CCAAGAAGCTCCAGGCGGCCTTCCAGAAGGCACGAGGGCAGCGACGCGTGACCACGGCGGACCCCGAGGGCCAGTACAAG
GCCCTGGAGAAGTTCGGCACCGACTTCACCGCCGCCGCCCGCGAGGGCAAGCTCGACCCGGTCATCGGCCGGGACCAGGA
GATCCGGCGGGTCGTGCAGGTGCTGTCCCGGCGGACCAAGAACAACCCCGTGCTGATCGGTGAGCCCGGTGTCGGCAAGA
CCGCCGTCGTCGAGGGGCTCGCCCAGCGGATCATCAAGGGGGACGTACCGGAGTCCCTCAAGGACAAGCGGCTCGTCGCG
CTCGACCTGGGCGCGATGGTCGCCGGGGCGAAGTACCGAGGTGAGTTCGAGGAGCGGCTGAAGACCGTCCTGGCCGAGAT
CAAGGACTCCGACGGGCAGATCATCACCTTCATCGACGAGCTGCACACCGTCGTCGGGGCCGGGGCCGGCGGCGACTCCG
CCATGGACGCCGGGAACATGCTCAAGCCGATGCTCGCGCGCGGTGAGCTGCGCATGGTGGGCGCCACGACCCTCGACGAG
TACCGGGAGCGGATCGAGAAGGACCCCGCCCTGGAGCGGCGCTTCCAGCAGGTGCTGGTCGCCGAGCCGACCGTCGAGGA
CTCCATCGCGATCCTGCGCGGGCTCAAGGGGCGGTACGAGGCCCACCACAAGGTGCAGATCGCGGACAGCGCCCTGGTCG
CCGCCGCATCGCTCTCCGACCGGTACATCACCTCCCGCTTCCTGCCCGACAAGGCCATCGACCTGGTCGACGAGGCCGCC
TCGCGGCTGCGCATGGAGATCGACTCGTCCCCCGTCGAGATCGACGAACTCCAGCGCGCCGTCGACCGGCTGAAGATGGA
GGAGCTGGCGATCGGCAAGGAGACCGACGCGGCCTCACGCGAGCGCCTGGAGAAGCTGCGCCGCGACCTCGCCGACAAGG
AGGAGGAGCTGCGCGGCCTCACCGCCCGCTGGGAGAAGGAGAAGCAGTCCCTCAACCGGGTCGGCGAGCTGAAGGAACGC
CTCGACGAGGTGCGCGGCCAGGCCGAACGAGCCCAGCGCGACGGCGACTTCGACACCGCCTCCAAGCTGCTCTACGGCGA
GATCCCCGCCCTGGAGAAGGAACTGGAGGCCGCCTCCGAGGCCGAGGAAGAGGTCGCGAAGGACACCATGGTCAAGGAGG
AGGTCGGCTCCGACGACATCGCCGACGTCGTCGCCTCCTGGACCGGCATCCCGGCCGGGCGCCTGCTGGAGGGCGAGACG
CAGAAGCTGCTGCGCATGGAGGATGAGCTCGGCAAGCGCCTCATCGGCCAGACGGAGGCGGTGCGCGCGGTGAGCGATGC
CGTACGCCGCAGCCGCGCCGGGATCGCCGACCCCGACCGCCCCACCGGCTCCTTCCTCTTCCTGGGCCCGACGGGCGTGG
GCAAGACCGAACTGGCCAAGGCCCTCGCCGACTTCCTCTTCGACGACGAGCGGGCGATGGTCCGCATCGACATGTCGGAG
TACAGCGAGAAGCACAGCGTGGCCCGGCTGGTCGGCGCCCCGCCCGGATACATCGGCTACGAGGAGGGCGGCCAGCTCAC
CGAGGCGGTGCGCCGCCGCCCGTACTCCGTCGTCCTGCTGGACGAGGTGGAGAAGGCCCACCCCGAGGTCTTCGACATCC
TGCTCCAGGTCCTGGACGACGGCCGGCTCACGGACGGCCAGGGCCGCACGGTCGACTTCCGCAACACGATCCTGGTGCTG
ACGTCGAACCTGGGCAGTCAGTTCCTGGTCGACCCGATCACCAGCGAGGAGGAGAAGAAGGAGCAGGTCCTGGAGGTGGT
GCGGACCTCGTTCAAGCCGGAGTTCCTCAACCGCCTGGACGACCTGGTCGTCTTCGCCGCGCTGACCAAGCCGGAGCTGG
AGCGCATCGCGAAGCTCCAGCTCGAGCGCCTGGCCAAGCGCCTCGCCGAGCGGCGCCTCACCCTGGACATCACGCCCGAG
GCCCTGGCCTGGCTCGCCGAGGAGGGCATGGACCCGGCGTACGGCGCCCGCCCGCTGCGCCGCCTCGTCCAGTCCGCCAT
CGGCGACCGCCTCGCCAAGGAGATCCTCTCCGGCGAGATCAAGGACGGCGACACGGTCCGGGTGGACCGCTTCGAGCAGG
GCCTGATCGTGGGCCCGGCCACGGGCACCGCGGGCAAGACGCTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.713 |
100 |
0.448 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
40.407 |
90.668 |
0.366 |
| clpE | Streptococcus mutans UA159 |
46.736 |
77.65 |
0.363 |