Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | VJ737_RS18110 | Genome accession | NZ_CP141909 |
| Coordinates | 4014937..4017462 (-) | Length | 841 a.a. |
| NCBI ID | WP_184594813.1 | Uniprot ID | A0A7W4ZTF9 |
| Organism | Streptomyces sp. CGMCC 4.1772 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4009937..4022462
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VJ737_RS18090 (VJ737_18090) | - | 4010721..4012316 (-) | 1596 | WP_184594821.1 | MDR family MFS transporter | - |
| VJ737_RS18095 (VJ737_18095) | - | 4012440..4013036 (+) | 597 | WP_184594819.1 | TetR/AcrR family transcriptional regulator | - |
| VJ737_RS18100 (VJ737_18100) | - | 4013059..4013772 (-) | 714 | WP_184594817.1 | M23 family metallopeptidase | - |
| VJ737_RS18105 (VJ737_18105) | - | 4014212..4014853 (+) | 642 | WP_184594815.1 | HAD family acid phosphatase | - |
| VJ737_RS18110 (VJ737_18110) | clpC | 4014937..4017462 (-) | 2526 | WP_184594813.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| VJ737_RS18115 (VJ737_18115) | - | 4017893..4018549 (+) | 657 | WP_184594811.1 | SCO3374 family protein | - |
| VJ737_RS18120 (VJ737_18120) | - | 4018559..4018894 (-) | 336 | WP_184594809.1 | Lsr2 family protein | - |
| VJ737_RS18125 (VJ737_18125) | - | 4019118..4019651 (-) | 534 | WP_184594808.1 | amino-acid N-acetyltransferase | - |
| VJ737_RS18130 (VJ737_18130) | - | 4019661..4020158 (-) | 498 | WP_184594806.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| VJ737_RS18135 (VJ737_18135) | - | 4020323..4020505 (-) | 183 | WP_184594804.1 | hypothetical protein | - |
| VJ737_RS18140 (VJ737_18140) | - | 4020524..4021240 (-) | 717 | WP_184594969.1 | hypothetical protein | - |
| VJ737_RS18145 (VJ737_18145) | - | 4021660..4022457 (-) | 798 | WP_184594802.1 | type III pantothenate kinase | - |
Sequence
Protein
Download Length: 841 a.a. Molecular weight: 92951.19 Da Isoelectric Point: 5.9358
>NTDB_id=838696 VJ737_RS18110 WP_184594813.1 4014937..4017462(-) (clpC) [Streptomyces sp. CGMCC 4.1772]
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKETATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
ALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAASGDKKSNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLT
QDDILKIVDLMIGKVDERLKDRDMGIELSQPAKELLAQKGYDPVLGARPLRRTIQREIEDSLSEKILFGELRPGHIVVVD
TEGEGEAKTFTFRGEEKAALPDVPPIEQAAGGTGPNLSKDA
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKETATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
ALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAASGDKKSNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLT
QDDILKIVDLMIGKVDERLKDRDMGIELSQPAKELLAQKGYDPVLGARPLRRTIQREIEDSLSEKILFGELRPGHIVVVD
TEGEGEAKTFTFRGEEKAALPDVPPIEQAAGGTGPNLSKDA
Nucleotide
Download Length: 2526 bp
>NTDB_id=838696 VJ737_RS18110 WP_184594813.1 4014937..4017462(-) (clpC) [Streptomyces sp. CGMCC 4.1772]
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACTGAGCACATCCTCCTGGGCCTGATCCACGAGGGTGAAGGTGTCGCCGCCAAGGCCCTTGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGGCAGGGGCAGCAGGCCCCGTCCGGGCACATCCCCTTC
ACCCCCCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGCGAGGCCCTTCAGCTGGGCCACAACTACATCGGCACGGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTCGTCAAGCTGGGCGCAGATCTCAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGTTACCAGGGCAAGGAGACCGCCACCGCCGGCGGGCCTGCCGAGGGCACG
CCCTCGACGTCCCTGGTCCTCGACCAGTTCGGCCGGAACCTCACCCAGGCCGCTCGTGAGTCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGTACGAAGAACAACCCGGTCCTGATCGGTGAGC
CCGGCGTCGGCAAGACCGCCGTCGTCGAGGGTCTCGCCCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTGGACCTCGGCGCGCTGGTCGCCGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA
GGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACGCTGGTCGGTGCGGGTGCCG
CCGAGGGCGCCATCGACGCGGCTTCCATCCTGAAGCCGATGCTGGCCCGCGGTGAGCTGCAGACCATCGGCGCCACCACG
CTGGACGAGTACCGCAAGCACCTGGAGAAGGACGCGGCCCTCGAGCGCCGCTTCCAGCCCATCCAGGTCGCGGAGCCGTC
CCTGCCGCACACGATCGAGATCCTCAAGGGTCTCCGTGACCGGTACGAGGCCCACCACCGCGTCTCGATCACCGACGAGG
CGCTGGTCCAGGCCGCCACGCTGGCCGACCGGTACATCTCGGACCGCTTCCTTCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGTTCCCGGATGCGCATCCGCCGGATGACCGCTCCGCCGGACCTCCGCGAGTTCGACGAGAAGATCGCCGGTGT
CCGCCGGGACAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGAAGGCCGCCTCCCTCCGCGACAAGGAGAAGCAGCTCC
TGGCCGCCAAGGCCAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAGCTGATC
GCCGAGGTCCTCGCGACCGCCACGGGCATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCCTCGCGTCTGCTGCGCATGGA
GGACGAGCTCCACAAGCGGGTCATCGGCCAGGTCGACGCCGTCAAGGCGCTGTCGAAGGCGATCCGCCGTACGCGTGCCG
GTCTGAAGGACCCGAAGCGTCCCGGTGGCTCGTTCATCTTCGCCGGCCCGTCCGGCGTCGGTAAGACCGAGCTGTCCAAG
GCGCTCGCCGAGTTCCTCTTCGGTGACGAGGACGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACACGGT
GTCGCGGCTCTTCGGTTCGCCCCCCGGCTACGTGGGCTACGAAGAGGGCGGCCAGCTGACCGAGAAGGTCCGCCGCAAGC
CGTTCTCCGTCGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTGCAGATCCTGGAGGAC
GGTCGCCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGCACCCG
GGACATCTCCAAGGGCTTCAACCTGGGCTTCGCGGCCTCGGGTGACAAGAAGTCGAACTACGAGCGCATGAAGAACAAGG
TGTCGGACGAGCTCAAGCAGCACTTCCGTCCCGAGTTCCTCAACCGCGTCGACGACGTGGTCGTCTTCCCGCAGCTGACC
CAGGACGACATCCTCAAGATCGTCGACCTGATGATCGGCAAGGTGGACGAGCGCCTGAAGGACCGGGACATGGGCATCGA
GCTCTCCCAGCCCGCCAAGGAGCTGCTGGCCCAGAAGGGCTACGACCCGGTGCTGGGTGCGCGTCCGCTGCGGCGCACCA
TCCAGCGTGAGATCGAGGACTCGCTGTCGGAGAAGATCCTCTTCGGCGAGCTGCGTCCCGGTCACATCGTGGTCGTGGAC
ACCGAGGGCGAGGGCGAGGCCAAGACCTTCACCTTCCGGGGTGAGGAGAAGGCGGCCCTCCCGGACGTCCCGCCGATCGA
GCAGGCGGCCGGTGGAACCGGGCCGAACCTGAGCAAGGACGCGTAA
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACTGAGCACATCCTCCTGGGCCTGATCCACGAGGGTGAAGGTGTCGCCGCCAAGGCCCTTGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGGCAGGGGCAGCAGGCCCCGTCCGGGCACATCCCCTTC
ACCCCCCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGCGAGGCCCTTCAGCTGGGCCACAACTACATCGGCACGGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTCGTCAAGCTGGGCGCAGATCTCAACCGGG
TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGTTACCAGGGCAAGGAGACCGCCACCGCCGGCGGGCCTGCCGAGGGCACG
CCCTCGACGTCCCTGGTCCTCGACCAGTTCGGCCGGAACCTCACCCAGGCCGCTCGTGAGTCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGTACGAAGAACAACCCGGTCCTGATCGGTGAGC
CCGGCGTCGGCAAGACCGCCGTCGTCGAGGGTCTCGCCCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTGGACCTCGGCGCGCTGGTCGCCGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA
GGTCCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTCCACACGCTGGTCGGTGCGGGTGCCG
CCGAGGGCGCCATCGACGCGGCTTCCATCCTGAAGCCGATGCTGGCCCGCGGTGAGCTGCAGACCATCGGCGCCACCACG
CTGGACGAGTACCGCAAGCACCTGGAGAAGGACGCGGCCCTCGAGCGCCGCTTCCAGCCCATCCAGGTCGCGGAGCCGTC
CCTGCCGCACACGATCGAGATCCTCAAGGGTCTCCGTGACCGGTACGAGGCCCACCACCGCGTCTCGATCACCGACGAGG
CGCTGGTCCAGGCCGCCACGCTGGCCGACCGGTACATCTCGGACCGCTTCCTTCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGTTCCCGGATGCGCATCCGCCGGATGACCGCTCCGCCGGACCTCCGCGAGTTCGACGAGAAGATCGCCGGTGT
CCGCCGGGACAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGAAGGCCGCCTCCCTCCGCGACAAGGAGAAGCAGCTCC
TGGCCGCCAAGGCCAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAGCTGATC
GCCGAGGTCCTCGCGACCGCCACGGGCATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCCTCGCGTCTGCTGCGCATGGA
GGACGAGCTCCACAAGCGGGTCATCGGCCAGGTCGACGCCGTCAAGGCGCTGTCGAAGGCGATCCGCCGTACGCGTGCCG
GTCTGAAGGACCCGAAGCGTCCCGGTGGCTCGTTCATCTTCGCCGGCCCGTCCGGCGTCGGTAAGACCGAGCTGTCCAAG
GCGCTCGCCGAGTTCCTCTTCGGTGACGAGGACGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACACGGT
GTCGCGGCTCTTCGGTTCGCCCCCCGGCTACGTGGGCTACGAAGAGGGCGGCCAGCTGACCGAGAAGGTCCGCCGCAAGC
CGTTCTCCGTCGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTGCAGATCCTGGAGGAC
GGTCGCCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGCACCCG
GGACATCTCCAAGGGCTTCAACCTGGGCTTCGCGGCCTCGGGTGACAAGAAGTCGAACTACGAGCGCATGAAGAACAAGG
TGTCGGACGAGCTCAAGCAGCACTTCCGTCCCGAGTTCCTCAACCGCGTCGACGACGTGGTCGTCTTCCCGCAGCTGACC
CAGGACGACATCCTCAAGATCGTCGACCTGATGATCGGCAAGGTGGACGAGCGCCTGAAGGACCGGGACATGGGCATCGA
GCTCTCCCAGCCCGCCAAGGAGCTGCTGGCCCAGAAGGGCTACGACCCGGTGCTGGGTGCGCGTCCGCTGCGGCGCACCA
TCCAGCGTGAGATCGAGGACTCGCTGTCGGAGAAGATCCTCTTCGGCGAGCTGCGTCCCGGTCACATCGTGGTCGTGGAC
ACCGAGGGCGAGGGCGAGGCCAAGACCTTCACCTTCCGGGGTGAGGAGAAGGCGGCCCTCCCGGACGTCCCGCCGATCGA
GCAGGCGGCCGGTGGAACCGGGCCGAACCTGAGCAAGGACGCGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
61.481 |
96.314 |
0.592 |
| clpC | Streptococcus mutans UA159 |
44.217 |
98.692 |
0.436 |
| clpC | Streptococcus pneumoniae D39 |
44.334 |
95.482 |
0.423 |
| clpC | Streptococcus pneumoniae Rx1 |
44.334 |
95.482 |
0.423 |
| clpC | Streptococcus thermophilus LMD-9 |
43.047 |
98.335 |
0.423 |
| clpC | Streptococcus thermophilus LMG 18311 |
42.874 |
98.454 |
0.422 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.704 |
96.314 |
0.421 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.361 |
94.887 |
0.421 |
| clpE | Streptococcus mutans UA159 |
54.313 |
74.435 |
0.404 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
53.226 |
73.722 |
0.392 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.809 |
74.078 |
0.391 |
| clpE | Streptococcus pneumoniae D39 |
52.648 |
74.078 |
0.39 |
| clpE | Streptococcus pneumoniae R6 |
52.648 |
74.078 |
0.39 |
| clpE | Streptococcus pneumoniae Rx1 |
52.648 |
74.078 |
0.39 |