Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   VJ737_RS07835 Genome accession   NZ_CP141909
Coordinates   1729324..1730013 (-) Length   229 a.a.
NCBI ID   WP_184588766.1    Uniprot ID   A0A7W4ZLY5
Organism   Streptomyces sp. CGMCC 4.1772     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1724324..1735013
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VJ737_RS07815 (VJ737_07815) - 1725508..1726089 (-) 582 WP_184588757.1 sugar kinase -
  VJ737_RS07820 (VJ737_07820) - 1726086..1727234 (-) 1149 WP_184588763.1 ROK family glucokinase -
  VJ737_RS07825 (VJ737_07825) - 1727383..1728120 (-) 738 WP_184590201.1 GntR family transcriptional regulator -
  VJ737_RS07830 (VJ737_07830) - 1728249..1729271 (+) 1023 WP_184588765.1 Gfo/Idh/MocA family oxidoreductase -
  VJ737_RS07835 (VJ737_07835) vraR 1729324..1730013 (-) 690 WP_184588766.1 response regulator transcription factor Regulator
  VJ737_RS07840 (VJ737_07840) - 1730118..1730909 (-) 792 WP_184590203.1 hypothetical protein -
  VJ737_RS07845 (VJ737_07845) - 1731889..1733751 (+) 1863 WP_184588768.1 caspase family protein -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 24692.43 Da        Isoelectric Point: 5.4255

>NTDB_id=838664 VJ737_RS07835 WP_184588766.1 1729324..1730013(-) (vraR) [Streptomyces sp. CGMCC 4.1772]
MTAIRLLLVDDDPLVRAGLSFMMGGADDIEIVGEAADGGEVEALVDRTRPDVVLMDIRMPTVDGLTATERLRARKDAPQV
VVLTTFHADEQVLRALRVGAAGFVLKDTPPTEILAAVRRVAAGDPVLSPTVTRQLMRHAVGTAADTRRARARARMAVLND
REREVAVAVGRGLANAEIATGLFMSVATVKTHVSRILAKLDLNNRVQIALLAYDAGLLDEERAEEQEGR

Nucleotide


Download         Length: 690 bp        

>NTDB_id=838664 VJ737_RS07835 WP_184588766.1 1729324..1730013(-) (vraR) [Streptomyces sp. CGMCC 4.1772]
ATGACTGCGATCAGACTGCTCCTCGTCGACGACGATCCGCTGGTGCGGGCCGGACTGTCCTTCATGATGGGCGGCGCCGA
CGACATCGAGATCGTCGGAGAGGCCGCCGACGGCGGCGAGGTGGAGGCGCTCGTCGACCGCACCCGCCCGGACGTCGTGC
TCATGGACATCCGGATGCCGACGGTGGACGGTCTCACGGCCACGGAGCGGCTGCGCGCCCGCAAGGACGCCCCGCAGGTG
GTGGTGCTCACCACCTTCCACGCCGACGAACAGGTGCTGCGGGCGCTGCGCGTGGGCGCCGCCGGTTTCGTCCTCAAGGA
CACCCCGCCCACCGAGATCCTCGCGGCGGTGCGCCGGGTCGCGGCCGGTGACCCGGTCCTGTCGCCCACGGTCACCCGTC
AGCTGATGAGGCACGCGGTCGGCACCGCCGCCGACACGCGCCGCGCACGCGCGCGTGCACGCATGGCCGTCCTCAACGAC
CGCGAGCGCGAGGTCGCCGTAGCGGTCGGCCGGGGCCTGGCCAACGCCGAGATCGCCACCGGCCTCTTCATGAGCGTCGC
CACCGTCAAGACACACGTCTCCCGCATCCTGGCCAAGCTCGACCTCAACAACCGGGTGCAGATCGCGCTGCTGGCGTACG
ACGCGGGGCTCCTGGACGAGGAGCGTGCGGAGGAACAGGAGGGGCGCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(7-118)

Bacterial regulatory proteins, luxR family (GerE)

(157-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7W4ZLY5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

38.073

95.197

0.362