Detailed information NTG0838599

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QN218_RS20890
• Genome accession: NZ_CP126534
• Coordinates: 4110532..4111677 (-)
• Length: 381 a.a.
• NCBI ID: WP_003235896.1
• Uniprot ID: A0A9W5LLN8
• Organism: Bacillus inaquosorum strain BSY82
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 4105532..4116677

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QN218_RS20865	-	4105795..4107870 (-)	2076	WP_060399743.1	transglycosylase domain-containing protein	-
QN218_RS20870	speE	4108072..4108902 (+)	831	WP_003235914.1	spermidine synthase	-
QN218_RS20875	speB	4108963..4109835 (+)	873	WP_060399742.1	agmatinase	-
QN218_RS20880	-	4109868..4110330 (-)	463	Protein_4057	YbaK/EbsC family protein	-
QN218_RS20885	phrF	4110429..4110548 (-)	120	WP_003222023.1	phosphatase RapF inhibitor PhrF	Regulator
QN218_RS20890	rapF	4110532..4111677 (-)	1146	WP_003235896.1	response regulator aspartate phosphatase RapF	Regulator
QN218_RS20895	-	4111907..4113268 (+)	1362	WP_060399740.1	YncE family protein	-
QN218_RS20900	-	4113308..4114684 (+)	1377	WP_060399739.1	YncE family protein	-
QN218_RS20905	-	4114691..4115392 (-)	702	WP_060399738.1	hypothetical protein	-
QN218_RS20910	-	4115389..4116669 (-)	1281	WP_060399737.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.00 Da
• Isoelectric Point: 5.1475

>NTDB_id=838599 QN218_RS20890 WP_003235896.1 4110532..4111677(-) (rapF) [Bacillus inaquosorum strain BSY82]
MTGVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFKKAYSMAEAENQPQLMGRTLYNIGLCKNSQSQYED
AVTYFKRAIAVFEESNIIPSLPQAYFLITQIHYKMGKMDKAHAYHSKGMAYSQKAGDSIYLSEFEFLKSLYLSGPDEEAI
QSFFDFLESKMLYADLEDFALDVAKYYHERENFQKASAYFLKVEQVRQLIQGGVRLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=838599 QN218_RS20890 WP_003235896.1 4110532..4111677(-) (rapF) [Bacillus inaquosorum strain BSY82]
GTGACAGGTGTCATATCTTCTTCTTCCGTCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
TGATGCAGAATATTTGCGAAGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCGCTAGAAAAAATGCGGATCGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGAGTCCTTGATTATTACTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTTAAAAAGGCCGAAAGCAAGTTGATATTCG
TTAAGGATCGAATAGAGAAGGCAGAGTTTTTCTTTAAAATGTCTGAGTCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAGGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTTCAGTGTCACTCTTT
ATTTGCTACCAATTTCTTAGATCTGAAACAATATGAGGATGCCATATCACATTTTAAAAAAGCTTACTCTATGGCGGAAG
CTGAGAATCAGCCCCAATTAATGGGAAGAACATTGTACAACATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCGTAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCTAATATTATACCTTCCCTGCCCCAAGCCTATTTTTT
AATTACACAAATTCATTATAAAATGGGAAAAATGGATAAAGCCCATGCATATCATAGTAAGGGAATGGCTTATTCTCAAA
AGGCCGGAGATTCAATATATTTATCGGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCTGATGAAGAAGCAATT
CAAAGTTTCTTTGATTTCCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTCTTGATGTGGCAAAATATTA
TCATGAACGTGAAAATTTTCAAAAAGCTTCTGCTTATTTCCTAAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGATTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	95.801	100	0.958
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572